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PMID: 15240133 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

Substitution of aspartic acid with glutamic acid increases the unfolding transition temperature of a protein.

Biochemical and biophysical research communications ·Vol. 320 ·No. 3 ·2004-07-30 ·Pages 900-6

Lee DY, Kim KA, Yu YG, Kim KS

Abstract

Proteins from thermophiles are more stable than those from mesophiles. Several factors have been suggested as causes for this greater stability, but no general rule has been found. The amino acid composition of thermophile proteins indicates that the content of polar amino acids such as Asn, Gln, Ser, and Thr is lower, and that of charged amino acids such as Arg, Glu, and Lys is higher than in mesophile proteins. Among charged amino acids, however, the content of Asp is even lower in thermophile proteins than in mesophile proteins. To investigate the reasons for the lower occurrence of Asp compared to Glu in thermophile proteins, Glu was substituted with Asp in a hyperthermophile protein, MjTRX, and Asp was substituted with Glu in a mesophile protein, ETRX. Each substitution of Glu with Asp decreased the Tm of MjTRX by about 2 degrees C, while each substitution of Asp with Glu increased the Tm of ETRX by about 1.5 degrees C. The change of Tm destabilizes the MjTRX by 0.55 kcal/mol and stabilizes the ETRX by 0.45 kcal/mol in free energy.

MeSH Terms
Amino Acid Sequence Amino Acid Substitution Aspartic Acid/chemistry,genetics Bacterial Proteins/chemistry,genetics Computer Simulation Euryarchaeota/classification,metabolism Glutamic Acid/chemistry,genetics Models, Molecular Molecular Sequence Data Mutagenesis, Site-Directed Mutation Protein Conformation Protein Denaturation Protein Folding Recombinant Proteins/biosynthesis,chemistry Species Specificity Structure-Activity Relationship Thioredoxins/chemistry,genetics Transition Temperature
Chemicals
Bacterial Proteins Recombinant Proteins Aspartic Acid Glutamic Acid Thioredoxins
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Lee Duck Yeon
Biomedical Research Center, Korea Institute of Science and Technology, Cheongyang Box 131, Seoul 130-650, Republic of Korea.
Kim Kyeong-Ae
Yu Yeon Gyu
Kim Key-Sun
Article Info
Journal
Biochemical and biophysical research communications
Abbr.
Biochem Biophys Res Commun
ISSN
0006-291X
Published
2004-07-30
Pages
900-6
Language
English
Region
United States
NLM ID
0372516
Subset
IM
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