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PMID: 15184020 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

ADP-binding to origin recognition complex of Saccharomyces cerevisiae.

Journal of molecular biology ·Vol. 340 ·No. 1 ·2004-06-25 ·Pages 29-37

Takenaka H, Makise M, Kuwae W, Takahashi N, Tsuchiya T, Mizushima T

Abstract

The origin recognition complex (ORC), a possible initiator of chromosomal DNA replication in eukaryotes, binds to ATP through its subunits Orc1p and Orc5p. Orc1p possesses ATPase activity. As for DnaA, the Escherichia coli initiator, the ATP-DnaA complex is active but the ADP-DnaA complex is inactive for DNA replication and, therefore, the ATPase activity of DnaA inactivates the ATP-DnaA complex to suppress the re-initiation of chromosomal DNA replication. We investigated ADP-binding to ORC by a filter-binding assay. The K(d) values for ADP-binding to wild-type ORC and to ORC-1A (ORC containing Orc1p with a defective Walker A motif) were less than 10nM, showing that Orc5p can bind to ADP with a high affinity, similar to ATP. ORC-5A (ORC containing Orc5p with a defective Walker A motif) did not bind to ADP, suggesting that the ADP-Orc1p complex is too unstable to be detected by the filter-binding assay. ADP dissociated more rapidly than ATP from wild-type ORC and ORC-1A. Origin DNA fragments did not stimulate ADP-binding to any type of ORC. In the presence of ADP, ORC could not bind to origin DNA in a sequence-specific manner. Thus, in eukaryotes, the ADP-ORC complex may be unable to initiate chromosomal DNA replication, and in this it resembles the ADP-DnaA complex in prokaryotes. However, overall control may be different. In eukaryotes, the ADP-ORC complex is unstable, suggesting that the ADP-ORC complex might rapidly become an ATP-ORC complex; whereas in prokaryotes, ADP remains bound to DnaA, keeping DnaA inactive, and preventing re-initiation for some periods.

MeSH Terms
Adenosine Diphosphate/metabolism Adenosine Triphosphate/metabolism Binding Sites DNA Replication DNA, Fungal/metabolism DNA-Binding Proteins/metabolism Electrophoretic Mobility Shift Assay Origin Recognition Complex Protein Binding Saccharomyces cerevisiae Proteins/metabolism
Chemicals
DNA, Fungal DNA-Binding Proteins Origin Recognition Complex Saccharomyces cerevisiae Proteins Adenosine Diphosphate Adenosine Triphosphate
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Takenaka Hitomi
Faculty of Pharmaceutical Sciences, Okayama University, Okayama 700-8530, Japan.
Makise Masaki
Kuwae Wakako
Takahashi Naoko
Tsuchiya Tomofusa
Mizushima Tohru
Article Info
Journal
Journal of molecular biology
Abbr.
J Mol Biol
ISSN
0022-2836
Published
2004-06-25
Pages
29-37
Language
English
Region
England
NLM ID
2985088R
Subset
IM
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