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PMID: 15111391 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

A mechanistic model of the actin cycle.

Biophysical journal ·Vol. 86 ·No. 5 ·2004-05-00 ·Pages 2720-39

Bindschadler M, Osborn EA, Dewey CF, McGrath JL

Abstract

We have derived a broad, deterministic model of the steady-state actin cycle that includes its major regulatory mechanisms. Ours is the first model to solve the complete nucleotide profile within filaments, a feature that determines the dynamics and geometry of actin networks at the leading edges of motile cells, and one that has challenged investigators developing models to interpret steady-state experiments. We arrived at the nucleotide profile through analytic and numerical approaches that completely agree. Our model reproduces behaviors seen in numerous experiments with purified proteins, but allows a detailed inspection of the concentrations and fluxes that might exist in these experiments. These inspections provide new insight into the mechanisms that determine the rate of actin filament treadmilling. Specifically, we find that mechanisms for enhancing Pi release from the ADP.Pi intermediate on filaments, for increasing the off rate of ADP-bound subunits at pointed ends, and the multiple, simultaneous functions of profilin, make unique and essential contributions to increased treadmilling. In combination, these mechanisms have a theoretical capacity to increase treadmilling to levels limited only by the amount of available actin. This limitation arises because as the cycle becomes more dynamic, it tends toward the unpolymerized state.

MeSH Terms
Actins/chemistry,physiology Adenosine Diphosphate/metabolism Adenosine Triphosphate/chemistry,metabolism Bacterial Physiological Phenomena Biophysics/methods Contractile Proteins/metabolism Hydrolysis Kinetics Magnesium/metabolism Microfilament Proteins/metabolism Models, Biological Models, Theoretical Nucleotides/chemistry Phosphates/metabolism Profilins Software Thymosin/chemistry
Chemicals
Actins Contractile Proteins Microfilament Proteins Nucleotides Phosphates Profilins Thymosin Adenosine Diphosphate Adenosine Triphosphate Magnesium
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Bindschadler M
Department of Biomedical Engineering, University of Rochester, Rochester, New York 14642, USA.
Osborn E A
Dewey C F
McGrath J L
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Article Info
Journal
Biophysical journal
Abbr.
Biophys J
ISSN
0006-3495
Published
2004-05-00
Pages
2720-39
Language
English
Region
United States
NLM ID
0370626
PMCID
PMC1304143
Subset
IM
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