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PMID: 15066838 Published · ppublish English Journal Article

Spatial distribution of marine crenarchaeota group I in the vicinity of deep-sea hydrothermal systems.

Applied and environmental microbiology ·Vol. 70 ·No. 4 ·2004-04-00 ·Pages 2404-13

Takai K, Oida H, Suzuki Y, Hirayama H, Nakagawa S, Nunoura T, Inagaki F, Nealson KH, Horikoshi K

Abstract

Distribution profiles of marine crenarchaeota group I in the vicinity of deep-sea hydrothermal systems were mapped with culture-independent molecular techniques. Planktonic samples were obtained from the waters surrounding two geographically and geologically distinct hydrothermal systems, and the abundance of marine crenarchaeota group I was examined by 16S ribosomal DNA clone analysis, quantitative PCR, and whole-cell fluorescence in situ hybridization. A much higher proportion of marine crenarchaeota group I within the microbial community was detected in deep-sea hydrothermal environments than in normal deep and surface seawaters. The highest proportion was always obtained from the ambient seawater adjacent to hydrothermal emissions and chimneys but not from the hydrothermal plumes. These profiles were markedly different from the profiles of epsilon-Proteobacteria, which are abundant in the low temperatures of deep-sea hydrothermal environments.

MeSH Terms
Base Sequence Crenarchaeota/classification,genetics,isolation & purification DNA, Archaeal/genetics DNA, Ribosomal/genetics Ecosystem Hot Temperature In Situ Hybridization, Fluorescence Indian Ocean Japan Molecular Sequence Data Pacific Ocean Phylogeny Plankton/genetics,isolation & purification Polymerase Chain Reaction Seawater/microbiology
Chemicals
DNA, Archaeal DNA, Ribosomal
Authors & Affiliations
9 authors, click to expand affiliations / ORCID
Takai Ken
Subground Animalcule Retrieval Project, Frontier Research System for Extremophiles, Japan Marine Science & Technology Center, Yokosuka 237-0061, Japan. kent@jamstec.go.jp
Oida Hanako
Suzuki Yohey
Hirayama Hisako
Nakagawa Satoshi
Nunoura Takuro
Inagaki Fumio
Nealson Kenneth H
Horikoshi Koki
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Article Info
Journal
Applied and environmental microbiology
Abbr.
Appl Environ Microbiol
ISSN
0099-2240
DOI
10.1128/AEM.70.4.2404-2413.2004
Email
kent@jamstec.go.jp
Published
2004-04-00
Pages
2404-13
Language
English
Region
United States
NLM ID
7605801
PMCID
PMC383094
Subset
IM
Databases
GENBANK
AB095113, AB095119, AB095135, AB095136, AB095137, AB108843, AB108844, AB108845, AB108846, AB108847, AB108848, AB108849
External Links
PubMed source DOI: 10.1128/AEM.70.4.2404-2413.2004 PMC Full Text View journal details
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