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PMID: 15007108 Published · epublish English Journal Article Research Support, Non-U.S. Gov't

Telomere-bound TRF1 and TRF2 stall the replication fork at telomeric repeats.

Nucleic acids research ·Vol. 32 ·No. 5 ·2004-00-00 ·Pages 1627-37

Ohki R, Ishikawa F

Abstract

Vertebrate telomeres consist of tandem repeats of T2AG3 and associated proteins including the telomeric DNA-binding proteins, TRF1 and TRF2. It has been proposed that telomeres assume two interswitchable states, the open state that is accessible to various trans-acting factors and the closed state that excludes those factors. TRF1 and TRF2 are believed to promote the formation of the closed state. However, little is known about how those two states influence DNA replication. We analyzed the effects of TRF1 and TRF2 on telomeric replication both in vitro and in vivo. By exploiting the in vitro replication system of linear SV40 DNA, we found that telomeric repeats are a poor replication template. Moreover, the addition of recombinant TRF1 and TRF2 significantly stalled the replication fork progression at telomeric repeats. When TRF1 was overexpressed in HeLa cells, cells with 4N DNA content were accumulated. Furthermore, cytological analyses revealed that the replication focus overlapped with telomere signals at a significantly higher frequency in TRF1-overexpressing cells than in control cells. The results suggest that TRF1 and TRF2 exert inhibitory effects on replication fork progression.

MeSH Terms
Cell Cycle DNA Replication HeLa Cells Humans Repetitive Sequences, Nucleic Acid Telomere/chemistry,genetics,metabolism Telomeric Repeat Binding Protein 1/metabolism,physiology Telomeric Repeat Binding Protein 2/metabolism,physiology
Chemicals
Telomeric Repeat Binding Protein 1 Telomeric Repeat Binding Protein 2
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Ohki Rieko
Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama 226-8501, Japan.
Ishikawa Fuyuki
References (55)
55 references, click to expand
  1. Equilibrium, kinetic, and footprinting studies of the Tus-Ter protein-DNA interaction.
    J Biol Chem. 1992 Apr 15;267(11):7434-43 PMID: 1313800
  2. Improved telomere detection using a telomere repeat probe (TTAGGG)n generated by PCR.
    Nucleic Acids Res. 1991 Sep 11;19(17):4780 PMID: 1891373
  3. Origin activation and formation of single-strand TG1-3 tails occur sequentially in late S phase on a yeast linear plasmid.
    Mol Cell Biol. 1993 Jul;13(7):4057-65 PMID: 8321213
  4. G-quartet structures in telomeric DNA.
    Annu Rev Biophys Biomol Struct. 1994;23:703-30 PMID: 7919797
  5. A human telomeric protein.
    Science. 1995 Dec 8;270(5242):1663-7 PMID: 7502076
  6. Analysis of replication intermediates by two-dimensional agarose gel electrophoresis.
    Methods Enzymol. 1995;262:613-27 PMID: 8594382
  7. Structure of a replication-terminator protein complexed with DNA.
    Nature. 1996 Oct 17;383(6601):598-603 PMID: 8857533
  8. A protein-counting mechanism for telomere length regulation in yeast.
    Science. 1997 Feb 14;275(5302):986-90 PMID: 9020083
  9. Control of telomere length by the human telomeric protein TRF1.
    Nature. 1997 Feb 20;385(6618):740-3 PMID: 9034193
  10. Block in anaphase chromosome separation caused by a telomerase template mutation.
    Science. 1997 Mar 7;275(5305):1478-81 PMID: 9045613
  11. Synthesis of the mammalian telomere lagging strand in vitro.
    J Biol Chem. 1997 May 2;272(18):11678-81 PMID: 9115215
  12. Telomeres in the mouse have large inter-chromosomal variations in the number of T2AG3 repeats.
    Proc Natl Acad Sci U S A. 1997 Jul 8;94(14):7423-8 PMID: 9207107
  13. Human telomeres contain two distinct Myb-related proteins, TRF1 and TRF2.
    Nat Genet. 1997 Oct;17(2):231-5 PMID: 9326950
  14. Replicon clusters are stable units of chromosome structure: evidence that nuclear organization contributes to the efficient activation and propagation of S phase in human cells.
    J Cell Biol. 1998 Mar 23;140(6):1285-95 PMID: 9508763
  15. Sequence-specific DNA recognition by the myb-like domain of the human telomere binding protein TRF1: a model for the protein-DNA complex.
    Nucleic Acids Res. 1998 Apr 1;26(7):1731-40 PMID: 9512546
  16. TRF1 promotes parallel pairing of telomeric tracts in vitro.
    J Mol Biol. 1998 Apr 24;278(1):79-88 PMID: 9571035
  17. Identification and characterization of a constitutively active STAT5 mutant that promotes cell proliferation.
    Mol Cell Biol. 1998 Jul;18(7):3871-9 PMID: 9632771
  18. The DNA replication fork in eukaryotic cells.
    Annu Rev Biochem. 1998;67:721-51 PMID: 9759502
  19. Tankyrase, a poly(ADP-ribose) polymerase at human telomeres.
    Science. 1998 Nov 20;282(5393):1484-7 PMID: 9822378
  20. Telomeric chromatin modulates replication timing near chromosome ends.
    Genes Dev. 1999 Jan 15;13(2):146-51 PMID: 9925638
  21. Replication fork pausing and recombination or "gimme a break".
    Genes Dev. 2000 Jan 1;14(1):1-10 PMID: 10640269
  22. Control of human telomere length by TRF1 and TRF2.
    Mol Cell Biol. 2000 Mar;20(5):1659-68 PMID: 10669743
  23. Mechanisms and consequences of replication fork arrest.
    Biochimie. 2000 Jan;82(1):5-17 PMID: 10717381
  24. Reprimo, a new candidate mediator of the p53-mediated cell cycle arrest at the G2 phase.
    J Biol Chem. 2000 Jul 28;275(30):22627-30 PMID: 10930422
  25. Tankyrase promotes telomere elongation in human cells.
    Curr Biol. 2000 Oct 19;10(20):1299-302 PMID: 11069113
  26. Telomeric protein Pin2/TRF1 induces mitotic entry and apoptosis in cells with short telomeres and is down-regulated in human breast tumors.
    Oncogene. 2001 Mar 22;20(12):1497-508 PMID: 11313893
  27. TRF1 inhibits telomere C-strand DNA synthesis in vitro.
    Biochemistry. 2001 Feb 27;40(8):2426-32 PMID: 11327863
  28. In vitro reconstitution of the end replication problem.
    Mol Cell Biol. 2001 Sep;21(17):5753-66 PMID: 11486015
  29. Replication dynamics of the yeast genome.
    Science. 2001 Oct 5;294(5540):115-21 PMID: 11588253
  30. Replication timing of human telomeric DNA and other repetitive sequences analyzed by fluorescence in situ hybridization and flow cytometry.
    Exp Cell Res. 2001 Dec 10;271(2):223-9 PMID: 11716534
  31. Solution structure of a telomeric DNA complex of human TRF1.
    Structure. 2001 Dec;9(12):1237-51 PMID: 11738049
  32. Mediation of proliferating cell nuclear antigen (PCNA)-dependent DNA replication through a conserved p21(Cip1)-like PCNA-binding motif present in the third subunit of human DNA polymerase delta.
    J Biol Chem. 2001 Dec 28;276(52):49258-66 PMID: 11595739
  33. A critical role for Pin2/TRF1 in ATM-dependent regulation. Inhibition of Pin2/TRF1 function complements telomere shortening, radiosensitivity, and the G(2)/M checkpoint defect of ataxia-telangiectasia cells.
    J Biol Chem. 2002 Mar 1;277(9):7420-9 PMID: 11744712
  34. Senescence induced by altered telomere state, not telomere loss.
    Science. 2002 Mar 29;295(5564):2446-9 PMID: 11923537
  35. Saccharomyces Rrm3p, a 5' to 3' DNA helicase that promotes replication fork progression through telomeric and subtelomeric DNA.
    Genes Dev. 2002 Jun 1;16(11):1383-96 PMID: 12050116
  36. Crystal structure of parallel quadruplexes from human telomeric DNA.
    Nature. 2002 Jun 20;417(6891):876-80 PMID: 12050675
  37. The spatio-temporal organization of DNA replication sites is identical in primary, immortalized and transformed mammalian cells.
    J Cell Sci. 2002 Nov 1;115(Pt 21):4037-51 PMID: 12356909
  38. Telomeric protein distributions and remodeling through the cell cycle in Saccharomyces cerevisiae.
    Mol Biol Cell. 2003 Feb;14(2):556-70 PMID: 12589054
  39. The telomere protein Taz1 is required to prevent and repair genomic DNA breaks.
    Mol Cell. 2003 Feb;11(2):303-13 PMID: 12620220
  40. Simian virus 40 DNA replication in vitro.
    Proc Natl Acad Sci U S A. 1984 Nov;81(22):6973-7 PMID: 6095264
  41. Cell cycle-dependent variations in the distribution of the nuclear protein cyclin proliferating cell nuclear antigen in cultured cells: subdivision of S phase.
    Proc Natl Acad Sci U S A. 1985 May;82(10):3262-6 PMID: 2860667
  42. T antigen and template requirements for SV40 DNA replication in vitro.
    EMBO J. 1985 Nov;4(11):2933-9 PMID: 2998767
  43. Structural organizations of replicon domains during DNA synthetic phase in the mammalian nucleus.
    Exp Cell Res. 1986 Aug;165(2):291-7 PMID: 3720850
  44. The localization of replication origins on ARS plasmids in S. cerevisiae.
    Cell. 1987 Nov 6;51(3):463-71 PMID: 2822257
  45. Time of replication of yeast centromeres and telomeres.
    Cell. 1988 Aug 12;54(4):505-13 PMID: 3042152
  46. A replication fork barrier at the 3' end of yeast ribosomal RNA genes.
    Cell. 1988 Nov 18;55(4):637-43 PMID: 3052854
  47. Mapping replicational sites in the eucaryotic cell nucleus.
    J Cell Biol. 1989 Jan;108(1):1-11 PMID: 2910875
  48. Replication timing of DNA sequences associated with human centromeres and telomeres.
    Mol Cell Biol. 1990 Dec;10(12):6348-55 PMID: 2247059
  49. Replication factors required for SV40 DNA replication in vitro. II. Switching of DNA polymerase alpha and delta during initiation of leading and lagging strand synthesis.
    J Biol Chem. 1991 Jan 25;266(3):1961-8 PMID: 1671046
  50. Termination of DNA replication of bacterial and plasmid chromosomes.
    Mol Microbiol. 1999 Mar;31(6):1611-8 PMID: 10209736
  51. Mammalian telomeres end in a large duplex loop.
    Cell. 1999 May 14;97(4):503-14 PMID: 10338214
  52. Normal human telomeres are not late replicating.
    Exp Cell Res. 1999 Sep 15;251(2):492-9 PMID: 10471333
  53. TRF1 binds a bipartite telomeric site with extreme spatial flexibility.
    EMBO J. 1999 Oct 15;18(20):5735-44 PMID: 10523316
  54. Formation of DNA triplexes accounts for arrests of DNA synthesis at d(TC)n and d(GA)n tracts.
    Proc Natl Acad Sci U S A. 1991 Jan 15;88(2):507-11 PMID: 1988950
  55. Replication forks pause at yeast centromeres.
    Mol Cell Biol. 1992 Sep;12(9):4056-66 PMID: 1508202
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
1362-4962
Published
2004-00-00
Epub
2004-00-08
Pages
1627-37
Language
English
Region
England
NLM ID
0411011
PMCID
PMC390322
Subset
IM
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