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PMID: 14747703 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

The impact of Lys-->Arg surface mutations on the crystallization of the globular domain of RhoGDI.

Acta crystallographica. Section D, Biological crystallography ·Vol. 60 ·No. Pt 2 ·2004-02-00 ·Pages 275-80

Czepas J, Devedjiev Y, Krowarsch D, Derewenda U, Otlewski J, Derewenda ZS

Abstract

The potential of rational surface mutagenesis for enhanced protein crystallization is being probed in an ongoing effort. In previous work, it was hypothesized that residues with high conformational entropy such as Glu and Lys are suitable targets for surface mutagenesis, as they are rarely incorporated in crystal contacts or protein-protein interfaces. Previous experiments using Lys-->Ala, Glu-->Ala and Glu-->Asp mutants confirmed that mutated proteins were more likely to crystallize. In the present paper, the usefulness of Lys-->Arg mutations is studied. Several mutations of the globular domain of human RhoGDI were generated, including the single mutants K105R, K113R, K127R, K138R and K141R, the double mutants K(98,99)R and K(199,200)R and the triple mutants K(98,99,105)R and K(135,138,141)R. It is shown that Lys-->Arg mutants are more likely to crystallize than the wild-type protein, although not as likely as Lys-->Ala mutants. Out of the nine mutants tested, five produced diffracting crystals, including the K(199,200)R double mutant, which crystallized in a new space group and exceeded by approximately 1.0 A the resolution of the diffraction of the wild-type crystal. Major crystal contacts in the new lattice were created by the mutated epitope.

MeSH Terms
Alanine/chemistry Arginine/chemistry Crystallization/methods Crystallography, X-Ray/methods Epitopes Escherichia coli/metabolism Glutamic Acid/chemistry Guanine Nucleotide Dissociation Inhibitors/chemistry Lysine/chemistry Models, Molecular Mutagenesis, Site-Directed Mutation Plasmids/metabolism Protein Conformation Protein Structure, Secondary Protein Structure, Tertiary Recombinant Proteins/chemistry Temperature rho Guanine Nucleotide Dissociation Inhibitor alpha rho-Specific Guanine Nucleotide Dissociation Inhibitors
Chemicals
ARHGDIA protein, human Epitopes Guanine Nucleotide Dissociation Inhibitors Recombinant Proteins rho Guanine Nucleotide Dissociation Inhibitor alpha rho-Specific Guanine Nucleotide Dissociation Inhibitors Glutamic Acid Arginine Lysine Alanine
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Czepas Jan
Department of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, VA 22908-0736, USA.
Devedjiev Yancho
Krowarsch Daniel
Derewenda Urszula
Otlewski Jacek
Derewenda Zygmunt S
Article Info
Journal
Acta crystallographica. Section D, Biological crystallography
Abbr.
Acta Crystallogr D Biol Crystallogr
ISSN
0907-4449
Published
2004-02-00
Epub
2004-00-23
Pages
275-80
Language
English
Region
United States
NLM ID
9305878
Subset
IM
Grants
NIGMS NIH HHS · GM62615 · United States
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