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PMID: 14715924 Published · epublish English Journal Article Research Support, Non-U.S. Gov't

Enhanced mutagenic potential of 8-oxo-7,8-dihydroguanine when present within a clustered DNA damage site.

Nucleic acids research ·Vol. 32 ·No. 1 ·2004-00-00 ·Pages 263-70

Pearson CG, Shikazono N, Thacker J, O'Neill P

Abstract

The formation of clustered DNA damage sites is a unique feature of ionizing radiation. Recent studies have shown that the repair of lesions within clusters may be compromised, but little is understood about the mutagenic consequences of such damage sites. Using a plasmid-based method, damaged DNA containing uracil positioned at 1-5 bp separations from 8-oxo-7,8-dihydroguanine on the complementary strand was transfected into wild-type Escherichia coli or into strains lacking the DNA glycosylases Fpg and MutY. Mutation frequencies were found to be significantly higher for clustered damage sites than for single lesions. The loss of MutY gave a large relative increase in mutation frequency and a strain lacking both Fpg and MutY showed even higher mutation frequencies, up to nearly 40% of rescued plasmid. In these strains, the mutation frequency decreases with increasing spacing of the uracil from the 8-oxo-7,8-dihydroguanine site. Sequencing of plasmid DNA carrying clustered damage, following rescue from bacteria, showed that almost all of the mutations are GC-->TA transversions. The data suggest that at clustered damage sites, depending on lesion spacing, the action of Fpg is compromised and post-replication processing of lesions by MutY is the most important mechanism for protection against mutagenesis.

MeSH Terms
Base Sequence DNA Damage DNA Glycosylases/deficiency,genetics,metabolism DNA Repair DNA-Formamidopyrimidine Glycosylase/deficiency,genetics,metabolism Escherichia coli/enzymology,genetics Escherichia coli Proteins/genetics,metabolism Gene Deletion Guanine/analogs & derivatives,metabolism Molecular Sequence Data Mutagenesis Plasmids/genetics
Chemicals
Escherichia coli Proteins 8-hydroxyguanine Guanine DNA Glycosylases mutY adenine glycosylase DNA-Formamidopyrimidine Glycosylase DNA-formamidopyrimidine glycosylase, E coli
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Pearson Colin G
Medical Research Council, Radiation and Genome Stability Unit, Harwell, Oxon OX11 0RD, UK.
Shikazono Naoya
Thacker John
O'Neill Peter
References (42)
42 references, click to expand
  1. Clustered DNA damage, influence on damage excision by XRS5 nuclear extracts and Escherichia coli Nth and Fpg proteins.
    J Biol Chem. 2000 Apr 21;275(16):11865-73 PMID: 10766813
  2. Response of base excision repair enzymes to complex DNA lesions.
    Radiat Res. 2001 Nov;156(5 Pt 2):584-9 PMID: 11604076
  3. Contribution of base lesions to radiation-induced clustered DNA damage: implication for models of radiation response.
    Radiat Res. 2001 Nov;156(5 Pt 2):590-3 PMID: 11604077
  4. Efficiency of incision of an AP site within clustered DNA damage by the major human AP endonuclease.
    Biochemistry. 2002 Jan 15;41(2):634-42 PMID: 11781104
  5. Clustered DNA damages induced by x rays in human cells.
    Radiat Res. 2002 Jun;157(6):611-6 PMID: 12005538
  6. Repair of clustered DNA lesions. Sequence-specific inhibition of long-patch base excision repair be 8-oxoguanine.
    J Biol Chem. 2002 Jun 14;277(24):21300-5 PMID: 11923315
  7. Clustered DNA damage induced by gamma radiation in human fibroblasts (HF19), hamster (V79-4) cells and plasmid DNA is revealed as Fpg and Nth sensitive sites.
    Nucleic Acids Res. 2002 Aug 1;30(15):3464-72 PMID: 12140332
  8. Chemical aspects of clustered DNA damage induction by ionising radiation.
    Radiat Prot Dosimetry. 2002;99(1-4):63-8 PMID: 12194362
  9. Sorting the consequences of ionizing radiation: processing of 8-oxoguanine/abasic site lesions.
    DNA Repair (Amst). 2002 Dec 5;1(12):1039-49 PMID: 12531013
  10. The mutation frequency of 8-oxo-7,8-dihydroguanine (8-oxodG) situated in a multiply damaged site: comparison of a single and two closely opposed 8-oxodG in Escherichia coli.
    DNA Repair (Amst). 2003 Jun 11;2(6):695-705 PMID: 12767348
  11. Repair of clustered uracil DNA damages in Escherichia coli.
    Nucleic Acids Res. 2003 Aug 1;31(15):4573-81 PMID: 12888518
  12. The origin of complete and mosaic mutants from mutagenic treatment of single cells.
    Mutat Res. 1967 Feb;4(1):1-14 PMID: 6027474
  13. Transformation of Escherichia coli with plasmid deoxyribonucleic acid: calcium-induced binding of deoxyribonucleic acid to whole cells and to isolated membrane fractions.
    J Bacteriol. 1981 Feb;145(2):780-7 PMID: 7007349
  14. Studies on transformation of Escherichia coli with plasmids.
    J Mol Biol. 1983 Jun 5;166(4):557-80 PMID: 6345791
  15. A set of lacZ mutations in Escherichia coli that allow rapid detection of each of the six base substitutions.
    Proc Natl Acad Sci U S A. 1989 Jul;86(14):5345-9 PMID: 2501784
  16. Site-specific mutagenesis using a gapped duplex vector: a study of translesion synthesis past 8-oxodeoxyguanosine in E. coli.
    Mutat Res. 1991 May;254(3):281-8 PMID: 2052015
  17. Evidence that MutY and MutM combine to prevent mutations by an oxidatively damaged form of guanine in DNA.
    Proc Natl Acad Sci U S A. 1992 Aug 1;89(15):7022-5 PMID: 1495996
  18. Mutagenesis by 8-oxoguanine: an enemy within.
    Trends Genet. 1993 Jul;9(7):246-9 PMID: 8379000
  19. Initial events in the cellular effects of ionizing radiations: clustered damage in DNA.
    Int J Radiat Biol. 1994 Jan;65(1):7-17 PMID: 7905912
  20. Substrate specificity of Fpg protein. Recognition and cleavage of oxidatively damaged DNA.
    J Biol Chem. 1994 May 27;269(21):15318-24 PMID: 7515054
  21. The complexity of DNA damage: relevance to biological consequences.
    Int J Radiat Biol. 1994 Nov;66(5):427-32 PMID: 7983426
  22. The action of Escherichia coli endonuclease III on multiply damaged sites in DNA.
    J Mol Biol. 1995 Jun 23;249(5):914-22 PMID: 7791217
  23. Reactivity of human apurinic/apyrimidinic endonuclease and Escherichia coli exonuclease III with bistranded abasic sites in DNA.
    J Biol Chem. 1997 Jun 20;272(25):15650-5 PMID: 9188454
  24. Multiply damaged sites in DNA: interactions with Escherichia coli endonucleases III and VIII.
    Nucleic Acids Res. 1998 Feb 15;26(4):932-41 PMID: 9461450
  25. Quantitative modelling of DNA damage using Monte Carlo track structure method.
    Radiat Environ Biophys. 1999 May;38(1):31-8 PMID: 10384953
  26. In vitro repair of synthetic ionizing radiation-induced multiply damaged DNA sites.
    J Mol Biol. 1999 Jul 16;290(3):667-84 PMID: 10395822
  27. The complexity of radiation-induced DNA damage as revealed by exposure to cell extracts.
    Radiat Res. 1999 Oct;152(4):421-7 PMID: 10477919
  28. A novel role for Escherichia coli endonuclease VIII in prevention of spontaneous G-->T transversions.
    J Bacteriol. 1999 Oct;181(20):6396-402 PMID: 10515930
  29. PURE CLONES OF LACTOSE-NEGATIVE MUTANTS OBTAINED IN ESCHERICHIA COLI AFTER TREATMENT WITH 5-BROMOURACIL.
    J Mol Biol. 1964 Apr;8:610-3 PMID: 14153532
  30. Accumulation of premutagenic DNA lesions in mice defective in removal of oxidative base damage.
    Proc Natl Acad Sci U S A. 1999 Nov 9;96(23):13300-5 PMID: 10557315
  31. SEGREGATION OF RADIATION-INDUCED MUTATIONS IN ESCHERICHIA COLI.
    Nature. 1964 Jul 18;203:270-2 PMID: 14201763
  32. MUTATION WITHOUT SEGREGATION.
    Proc Natl Acad Sci U S A. 1964 Dec;52:1374-81 PMID: 14243511
  33. Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda.
    Microbiol Mol Biol Rev. 1999 Dec;63(4):751-813, table of contents PMID: 10585965
  34. Clustered DNA damages induced in isolated DNA and in human cells by low doses of ionizing radiation.
    Proc Natl Acad Sci U S A. 2000 Jan 4;97(1):103-8 PMID: 10618378
  35. Passing the baton in base excision repair.
    Nat Struct Biol. 2000 Mar;7(3):176-8 PMID: 10700268
  36. Excision of 8-oxoguanine within clustered damage by the yeast OGG1 protein.
    Nucleic Acids Res. 2001 Mar 1;29(5):1107-13 PMID: 11222760
  37. Recognition and kinetics for excision of a base lesion within clustered DNA damage by the Escherichia coli proteins Fpg and Nth.
    Biochemistry. 2001 May 15;40(19):5738-46 PMID: 11341839
  38. Abortive base-excision repair of radiation-induced clustered DNA lesions in Escherichia coli.
    Proc Natl Acad Sci U S A. 2001 Jun 19;98(13):7426-30 PMID: 11404468
  39. Securing genome stability by orchestrating DNA repair: removal of radiation-induced clustered lesions in DNA.
    Bioessays. 2001 Aug;23(8):745-9 PMID: 11494323
  40. Efficiency of excision of 8-oxo-guanine within DNA clustered damage by XRS5 nuclear extracts and purified human OGG1 protein.
    Biochemistry. 2001 Oct 2;40(39):11811-8 PMID: 11570881
  41. Computational approach for determining the spectrum of DNA damage induced by ionizing radiation.
    Radiat Res. 2001 Nov;156(5 Pt 2):577-83 PMID: 11604075
  42. DNA damage induced in cells by gamma and UVA radiation as measured by HPLC/GC-MS and HPLC-EC and Comet assay.
    Chem Res Toxicol. 2000 Jul;13(7):541-9 PMID: 10898585
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
1362-4962
Published
2004-00-00
Epub
2004-00-09
Pages
263-70
Language
English
Region
England
NLM ID
0411011
PMCID
PMC373263
Subset
IM
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