Home LiteratureArticle Details
PMID: 14674696 Published · ppublish English Journal Article

Polyhydroxyalkanoate (PHA) biosynthesis in Thermus thermophilus: purification and biochemical properties of PHA synthase.

Molecular and cellular biochemistry ·Vol. 254 ·No. 1-2 ·2003-12-00 ·Pages 173-83

Pantazaki AA, Tambaka MG, Langlois V, Guerin P, Kyriakidis DA

Abstract

The biosynthesis of polyhydroxyalkanoates (PHAs) was studied, for the first time, in the thermophilic bacterium Thermus thermophilus. Using sodium gluconate (1.5% w/v) or sodium octanoate (10 mM) as sole carbon sources, PHAs were accumulated to approximately 35 or 40% of the cellular dry weight, respectively. Gas chromatographic analysis of PHA isolated from gluconate-grown cells showed that the polyester (Mw: 480,000 g mol(-1)) was mainly composed of 3-hydroxydecanoate (3HD) with a molar fraction of 64%. In addition, 3-hydroxyoctanoate (3HO), 3-hydroxyvalerate (3HV) and 3-hydroxybutyrate (3HB) occurred as constituents. In contrast, the polyester (Mw: 391,000 g mol(-1)) from octanoate-grown cells was composed of 24.5 mol% 3HB, 5.4 mol% 3HO, 12.3 mol% 3-hydroxynonanoate (3HN), 14.6 mol% 3HD, 35.4 mol% 3-hydroxyundecanoate (3HUD) and 7.8 mol% 3-hydroxydodecanoate (3HDD). Activities of PHA synthase, a beta-ketothiolase and an NADPH-dependent reductase were detected in the soluble cytosolic fraction obtained from gluconate-grown cells of T. thermophilus. The soluble PHA synthase was purified 4271-fold with 8.5% recovery from gluconate-grown cells, presenting a Km of 0.25 mM for 3HB-CoA. The optimal temperature of PHA synthase activity was about 70 degrees C and acts optimally at pH near 7.3. PHA synthase activity was inhibited 50% with 25 microM CoA and lost all of its activity when it was treated with alkaline phosphatase. T. thermophilus PHA synthase, in contrary to other reported PHA synthases did not exhibit a lag phase on its kinetics, when low concentration of the enzyme was used. Incubation of PHA synthase with 1 mM N-ethyl-maleimide inhibits the enzyme 56%, indicating that cysteine might be involved in the catalytic site of the enzyme. Acetyl phosphate (10 mM) activated both the native and the dephosphorylated enzyme. A major protein (55 kDa) was detected by SDS-PAGE. When a partially purified preparation was analyzed on native PAGE the major band exhibiting PHA synthase activity was eluted from the gel and analyzed further on SDS-PAGE, presenting the first purification of a PHA synthase from a thermophilic microorganism.

MeSH Terms
3-Hydroxybutyric Acid/chemistry Acetyl-CoA C-Acyltransferase/chemistry,metabolism Acyltransferases/chemistry,isolation & purification Alkaline Phosphatase/chemistry,metabolism Caprylates/chemistry,pharmacology Carbon/chemistry Carboxylic Acids/metabolism Catalysis Catalytic Domain Chromatography, Gas Chromatography, Gel Cytosol/enzymology,metabolism Dose-Response Relationship, Drug Electrophoresis, Polyacrylamide Gel Ethylmaleimide/pharmacology Gluconates/chemistry,pharmacology Hydrogen-Ion Concentration Kinetics Microscopy, Electron, Scanning NADP/metabolism Organophosphates/chemistry Pentanoic Acids/chemistry Phosphorylation Polyesters/chemistry,metabolism Temperature Thermus thermophilus/metabolism Time Factors
Chemicals
Caprylates Carboxylic Acids Gluconates Organophosphates Pentanoic Acids Polyesters beta-hydroxyvaleric acid NADP acetyl phosphate Carbon 3-hydroxyoctanoic acid Acyltransferases poly(3-hydroxyalkanoic acid) synthase Acetyl-CoA C-Acyltransferase Alkaline Phosphatase Ethylmaleimide octanoic acid gluconic acid 3-Hydroxybutyric Acid
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Pantazaki Anastasia A
Laboratory of Biochemistry, Department of Chemistry, Aristotle University of Thessaloniki, Thessaloniki, Greece. natasa@chem.auth.gr
Tambaka Maria G
Langlois Valerie
Guerin Philippe
Kyriakidis Dimitrios A
References (30)
30 references, click to expand
  1. Cloning and molecular analysis of the Poly(3-hydroxybutyrate) and Poly(3-hydroxybutyrate-co-3-hydroxyalkanoate) biosynthesis genes in Pseudomonas sp. strain 61-3.
    J Bacteriol. 1998 Dec;180(24):6459-67 PMID: 9851987
  2. Identification of a new class of biopolymer: bacterial synthesis of a sulfur-containing polymer with thioester linkages.
    Microbiology. 2001 Jan;147(Pt 1):11-9 PMID: 11160796
  3. Formation of polyesters consisting of medium-chain-length 3-hydroxyalkanoic acids from gluconate by Pseudomonas aeruginosa and other fluorescent pseudomonads.
    Appl Environ Microbiol. 1990 Nov;56(11):3360-7 PMID: 2125185
  4. Biotechnologically relevant enzymes from Thermus thermophilus.
    Appl Microbiol Biotechnol. 2002 Jan;58(1):1-12 PMID: 11831469
  5. Purification and characterization of the poly(hydroxyalkanoic acid) synthase from Chromatium vinosum and localization of the enzyme at the surface of poly(hydroxyalkanoic acid) granules.
    Eur J Biochem. 1994 Nov 15;226(1):71-80 PMID: 7957260
  6. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  7. In vitro biosynthesis of poly(3-hydroxybutyric acid) by using purified poly(hydroxyalkanoic acid) synthase of Chromatium vinosum.
    Appl Microbiol Biotechnol. 1998 Mar;49(3):258-66 PMID: 9581289
  8. Overexpression and purification of the soluble polyhydroxyalkanoate synthase from Alcaligenes eutrophus: evidence for a required posttranslational modification for catalytic activity.
    Biochemistry. 1994 Aug 9;33(31):9311-20 PMID: 8049232
  9. Analysis of in vivo substrate specificity of the PHA synthase from Ralstonia eutropha: formation of novel copolyesters in recombinant Escherichia coli.
    FEMS Microbiol Lett. 2000 Jan 1;182(1):111-7 PMID: 10612741
  10. Bacterial polyhydroxyalkanoates.
    Biotechnol Bioeng. 1996 Jan 5;49(1):1-14 PMID: 18623547
  11. Metabolism of poly(3-hydroxyalkanoates) (PHAs) by Pseudomonas oleovorans. Identification and sequences of genes and function of the encoded proteins in the synthesis and degradation of PHA.
    J Biol Chem. 1991 Feb 5;266(4):2191-8 PMID: 1989978
  12. Control of poly-beta-hydroxybutyrate synthase mediated by acetyl phosphate in cyanobacteria.
    J Bacteriol. 1997 Aug;179(16):5009-13 PMID: 9260940
  13. Biosynthetic thiolase from zoogloea ramigera. I. Preliminary characterization and analysis of proton transfer reaction.
    J Biol Chem. 1987 Jan 5;262(1):82-9 PMID: 2878927
  14. The NADPH-linked acetoacetyl-CoA reductase from Zoogloea ramigera. Characterization and mechanistic studies of the cloned enzyme over-produced in Escherichia coli.
    Eur J Biochem. 1988 May 16;174(1):177-82 PMID: 3286259
  15. Physiology and molecular genetics of poly(beta-hydroxy-alkanoic acid) synthesis in Alcaligenes eutrophus.
    Mol Microbiol. 1991 Mar;5(3):535-42 PMID: 2046547
  16. Metabolic routing towards polyhydroxyalkanoic acid synthesis in recombinant Escherichia coli (fadR): inhibition of fatty acid beta-oxidation by acrylic acid.
    FEMS Microbiol Lett. 1998 Oct 1;167(1):89-94 PMID: 9785457
  17. Molecular basis for biosynthesis and accumulation of polyhydroxyalkanoic acids in bacteria.
    FEMS Microbiol Rev. 1992 Dec;9(2-4):217-30 PMID: 1476773
  18. Extremophiles as a source of novel enzymes for industrial application.
    Appl Microbiol Biotechnol. 1999 Jun;51(6):711-29 PMID: 10422220
  19. Enzymatic synthesis of poly-beta-hydroxybutyrate in Zoogloea ramigera.
    Arch Microbiol. 1976 Nov 2;110(23):149-56 PMID: 1015943
  20. Optimization of microbial poly(3-hydroxybutyrate) recover using dispersions of sodium hypochlorite solution and chloroform.
    Biotechnol Bioeng. 1994 Jun 20;44(2):256-61 PMID: 18618692
  21. A new metabolic link between fatty acid de novo synthesis and polyhydroxyalkanoic acid synthesis. The PHAG gene from Pseudomonas putida KT2440 encodes a 3-hydroxyacyl-acyl carrier protein-coenzyme a transferase.
    J Biol Chem. 1998 Sep 11;273(37):24044-51 PMID: 9727022
  22. Occurrence of polyhydroxyalkanoic acid granule-associated proteins related to the Alcaligenes eutrophus H16 GA24 protein in other bacteria.
    FEMS Microbiol Lett. 1996 Jan 1;135(1):23-30 PMID: 8598273
  23. Pseudomonas oleovorans as a Source of Poly(beta-Hydroxyalkanoates) for Potential Applications as Biodegradable Polyesters.
    Appl Environ Microbiol. 1988 Aug;54(8):1977-82 PMID: 16347708
  24. Biochemical and genetic analysis of PHA synthases and other proteins required for PHA synthesis.
    Int J Biol Macromol. 1999 Jun-Jul;25(1-3):3-19 PMID: 10416645
  25. Functional expression of the PHA synthase gene phaC1 from Pseudomonas aeruginosa in Escherichia coli results in poly(3-hydroxyalkanoate) synthesis.
    FEMS Microbiol Lett. 1997 May 15;150(2):303-9 PMID: 9170275
  26. PHA synthase from chromatium vinosum: cysteine 149 is involved in covalent catalysis.
    Biochemistry. 1999 Jan 12;38(2):826-37 PMID: 9888824
  27. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.
    Anal Biochem. 1976 May 7;72:248-54 PMID: 942051
  28. Matrix-assisted in vitro refolding of Pseudomonas aeruginosa class II polyhydroxyalkanoate synthase from inclusion bodies produced in recombinant Escherichia coli.
    Biochem J. 2001 Aug 15;358(Pt 1):263-8 PMID: 11485576
  29. In vitro synthesis of poly(3-hydroxydecanoate): purification and enzymatic characterization of type II polyhydroxyalkanoate synthases PhaC1 and PhaC2 from Pseudomonas aeruginosa.
    Appl Microbiol Biotechnol. 2000 Jul;54(1):37-43 PMID: 10952003
  30. Enzyme-catalyzed synthesis of poly[(R)-(-)-3-hydroxybutyrate]: formation of macroscopic granules in vitro.
    Proc Natl Acad Sci U S A. 1995 Jul 3;92(14):6279-83 PMID: 7603982
Article Info
Journal
Molecular and cellular biochemistry
Abbr.
Mol Cell Biochem
ISSN
0300-8177
Published
2003-12-00
Pages
173-83
Language
English
Region
Netherlands
NLM ID
0364456
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com