Home LiteratureArticle Details
PMID: 14613106 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

4-fluorophenylglycine as a label for 19F NMR structure analysis of membrane-associated peptides.

Chembiochem : a European journal of chemical biology ·Vol. 4 ·No. 11 ·2003-11-07 ·Pages 1151-63

Afonin S, Glaser RW, Berditchevskaia M, Wadhwani P, Gührs KH, Möllmann U, Perner A, Ulrich AS

Abstract

The non-natural amino acid 4-fluorophenylglycine (4F-Phg) was incorporated into several representative membrane-associated peptides for dual purpose. The (19)F-substituted ring is directly attached to the peptide backbone, so it not only provides a well-defined label for highly sensitive (19)F NMR studies but, in addition, the D and L enantiomers of the stiff side chain may serve as reporter groups on the transient peptide conformation during the biological function. Besides peptide synthesis, which is accompanied by racemisation of 4F-Phg, we also describe separation of the epimers by HPLC and removal of trifluoroacetic acid. As a first example, 18 different analogues of the fusogenic peptide "B18" were prepared and tested for induction of vesicle fusion; the results confirmed that hydrophobic sites tolerated 4F-Phg labelling. Similar fusion activities within each pair of epimers suggest that the peptide is less structured in the fusogenic transition state than in the helical ground state. In a second example, five doubly labelled analogues of the antimicrobial peptide gramicidin S were compared by using bacterial growth inhibition assays. This cyclic beta-sheet peptide could accommodate both L and D substituents on its hydrophobic face. As a third example, we tested six analogues of the antimicrobial peptide PGLa. The presence of d-4F-Phg reduced the biological activity of the peptide by interfering with its amphiphilic alpha-helical fold. Finally, to illustrate the numerous uses of l-4F-Phg in (19)F NMR spectroscopy, we characterised the interaction of labelled PGLa with uncharged and negatively charged membranes. Observing the signal of the free peptide in an aqueous suspension of unilamellar vesicles, we found a linear saturation behaviour that was dominated by electrostatic attraction of the cationic PGLa. Once the peptide is bound to the membrane, however, solid-state (19)F NMR spectroscopy of macroscopically oriented samples revealed that the charge density has virtually no further influence on the structure, alignment or mobility of the peptide.

MeSH Terms
Affinity Labels/chemistry Antimicrobial Cationic Peptides/analysis,metabolism,pharmacology Bacterial Proteins/metabolism Binding Sites Escherichia coli/drug effects,metabolism Fluorine Glycine/analogs & derivatives,chemistry Magnetic Resonance Spectroscopy Membrane Proteins/metabolism Models, Molecular Staphylococcus aureus/drug effects,metabolism
Chemicals
Affinity Labels Antimicrobial Cationic Peptides Bacterial Proteins Membrane Proteins Fluorine 4-fluorophenylglycine Glycine
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Afonin Sergii
Forschungszentrum Karlsruhe, IFIA, P.O.B. 3640, 76021 Karlsruhe, Germany.
Glaser Ralf W
Berditchevskaia Marina
Wadhwani Parvesh
Gührs Karl-Heinz
Möllmann Ute
Perner Andrea
Ulrich Anne S
Article Info
Journal
Chembiochem : a European journal of chemical biology
Abbr.
Chembiochem
ISSN
1439-4227
Published
2003-11-07
Pages
1151-63
Language
English
Region
Germany
NLM ID
100937360
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com