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PMID: 14612446 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Cation-pi interactions as determinants for binding of the compatible solutes glycine betaine and proline betaine by the periplasmic ligand-binding protein ProX from Escherichia coli.

The Journal of biological chemistry ·Vol. 279 ·No. 7 ·2004-02-13 ·Pages 5588-96

Schiefner A, Breed J, Bösser L, Kneip S, Gade J, Holtmann G, Diederichs K, Welte W, Bremer E

Abstract

Compatible solutes such as glycine betaine and proline betaine are accumulated to exceedingly high intracellular levels by many organisms in response to high osmolarity to offset the loss of cell water. They are excluded from the immediate hydration shell of proteins and thereby stabilize their native structure. Despite their exclusion from protein surfaces, the periplasmic ligand-binding protein ProX from the Escherichia coli ATP-binding cassette transport system ProU binds the compatible solutes glycine betaine and proline betaine with high affinity and specificity. To understand the mechanism of compatible solute binding, we determined the high resolution structure of ProX in complex with its ligands glycine betaine and proline betaine. This crystallographic study revealed that cation-pi interactions between the positive charge of the quaternary amine of the ligands and three tryptophan residues forming a rectangular aromatic box are the key determinants of the high affinity binding of compatible solutes by ProX. The structural analysis was combined with site-directed mutagenesis of the ligand binding pocket to estimate the contributions of the tryptophan residues involved in binding.

MeSH Terms
Amino Acid Motifs Amino Acid Sequence Betaine/chemistry Binding Sites Biochemistry/methods Carbon Cations Crystallography, X-Ray Disulfides Escherichia coli/metabolism Escherichia coli Proteins/chemistry Ligands Membrane Transport Proteins/chemistry Models, Molecular Molecular Sequence Data Mutagenesis, Site-Directed Mutation Periplasmic Binding Proteins/chemistry Proline/analogs & derivatives,chemistry Protein Binding Protein Conformation Sequence Homology, Amino Acid Tryptophan/chemistry
Chemicals
Cations Disulfides Escherichia coli Proteins Ligands Membrane Transport Proteins PROX protein, E coli Periplasmic Binding Proteins Betaine Carbon Tryptophan Proline stachydrine
Authors & Affiliations
9 authors, click to expand affiliations / ORCID
Schiefner André
Fachbereich Biologie, Universität Konstanz, Universitätsstrasse 10, D-78457 Konstanz, Germany.
Breed Jason
Bösser Linda
Kneip Susanne
Gade Jutta
Holtmann Gudrun
Diederichs Kay
Welte Wolfram
Bremer Erhard
Article Info
Journal
The Journal of biological chemistry
Abbr.
J Biol Chem
ISSN
0021-9258
Published
2004-02-13
Epub
2003-00-11
Pages
5588-96
Language
English
Region
United States
NLM ID
2985121R
Subset
IM
Databases
PDB
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