Abstract
A genomic clone has been isolated which contains an open reading frame of 1191 bp interrupted by two small introns. The ORF has been sequenced and the transcriptional start determined. The predicted amino acid sequence shows homology to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in tomato. The genomic clone was isolated using a partial cDNA clone, TP10, which had been isolated from a Nicotiana tabacum pollen cDNA library by means of differential screening. TP10 has been fully sequenced and contains an open reading frame of 792 bp which shows 96% homology to the ORF in the genomic clone. The transcript corresponding to TP10 is maximally expressed late in pollen development, and has not been detected in vegetative tissues.
MeSH Terms
Amino Acid Sequence
Base Sequence
Chromosome Mapping
Gene Library
Genes, Plant/genetics
Molecular Sequence Data
Morphogenesis/genetics
Open Reading Frames
Plants, Toxic
Pollen/genetics
Polysaccharide-Lyases/genetics
RNA, Messenger/genetics
Sequence Homology, Amino Acid
Tissue Distribution
Tobacco/enzymology,genetics,growth & development
Transcription, Genetic
Chemicals
RNA, Messenger
Polysaccharide-Lyases
pectate lyase
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Rogers H J
Cambridge Laboratory, AFRC Institute of Plant Science Research, John Innes Centre, Norwich, UK.
Harvey A
Lonsdale D M
References (29)
29 references, click to expand
-
Characterization of the Erwinia carotovora pelA gene and its product pectate lyase A.
Gene. 1988;62(1):159-64
PMID: 3371662
-
Speeding-up the sequencing of double-stranded DNA.
Nucleic Acids Res. 1988 Jun 10;16(11):5198
PMID: 3387227
-
Isolation of galactose-inducible DNA sequences from Saccharomyces cerevisiae by differential plaque filter hybridization.
Cell. 1979 Feb;16(2):443-52
PMID: 378392
-
A simple and very efficient method for generating cDNA libraries.
Gene. 1983 Nov;25(2-3):263-9
PMID: 6198242
-
Control of the developmental pathway of tobacco pollen in vitro.
Planta. 1986 Sep;168(4):427-32
PMID: 24232317
-
A new method for predicting signal sequence cleavage sites.
Nucleic Acids Res. 1986 Jun 11;14(11):4683-90
PMID: 3714490
-
Gibberellic-acid-regulated expression of α-amylase and six other genes in wheat aleurone layers.
Planta. 1983 May;157(6):493-501
PMID: 24264413
-
A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.
Anal Biochem. 1983 Jul 1;132(1):6-13
PMID: 6312838
-
Different Temporal and Spatial Gene Expression Patterns Occur during Anther Development.
Plant Cell. 1990 Dec;2(12):1201-1224
PMID: 12354953
-
Pollen- and anther-specific chi promoters from petunia: tandem promoter regulation of the chiA gene.
Plant Cell. 1990 May;2(5):393-401
PMID: 2152165
-
Promoter analysis of genes that are coordinately expressed during pollen development reveals pollen-specific enhancer sequences and shared regulatory elements.
Genes Dev. 1991 Mar;5(3):496-507
PMID: 1840556
-
A gene showing sequence similarity to pectin esterase is specifically expressed in developing pollen of Brassica napus. Sequences in its 5' flanking region are conserved in other pollen-specific promoters.
Plant Mol Biol. 1991 Apr;16(4):501-13
PMID: 1868195
-
Sequencing and identification of a cDNA clone for tomato polygalacturonase.
Nucleic Acids Res. 1986 Nov 11;14(21):8595-603
PMID: 3786135
-
CLUSTAL: a package for performing multiple sequence alignment on a microcomputer.
Gene. 1988 Dec 15;73(1):237-44
PMID: 3243435
-
DNA sequencing with chain-terminating inhibitors.
Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7
PMID: 271968
-
N-terminal amino acid sequence of a major allergen of Japanese cedar pollen (Cry j I).
FEBS Lett. 1988 Nov 7;239(2):329-32
PMID: 3181436
-
Molecular analysis of male gametogenesis in plants.
Trends Genet. 1991 Sep;7(9):298-303
PMID: 1763428
-
Chitinase, beta-1,3-glucanase, osmotin, and extensin are expressed in tobacco explants during flower formation.
Plant Cell. 1990 Jul;2(7):673-84
PMID: 2152343
-
A comprehensive set of sequence analysis programs for the VAX.
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):387-95
PMID: 6546423
-
Extracellular and periplasmic isoenzymes of pectate lyase from Erwinia carotovora subspecies carotovora belong to different gene families.
Mol Microbiol. 1989 Dec;3(12):1785-95
PMID: 2695748
-
Characterization of the Erwinia carotovora pelB gene and its product pectate lyase.
J Bacteriol. 1987 Sep;169(9):4379-83
PMID: 3040692
-
An inspection of the domain between putative TATA box and translation start site in 79 plant genes.
Nucleic Acids Res. 1987 Aug 25;15(16):6643-53
PMID: 3628002
-
Characterization of pollen polygalacturonase encoded by several cDNA clones in maize.
Plant Mol Biol. 1991 Dec;17(6):1155-64
PMID: 1932692
-
Characterization of a gene family abundantly expressed in Oenothera organensis pollen that shows sequence similarity to polygalacturonase.
Plant Cell. 1990 Mar;2(3):263-74
PMID: 2152116
-
α-amylase genes of wheat are two multigene families which are differentially expressed.
Plant Mol Biol. 1985 Jan;5(1):13-24
PMID: 24306536
-
Structure and organization of the pel genes from Erwinia chrysanthemi EC16.
J Bacteriol. 1988 Aug;170(8):3468-78
PMID: 3042750
-
Promoter sequences from a maize pollen-specific gene direct tissue-specific transcription in tobacco.
Mol Gen Genet. 1990 Nov;224(2):161-8
PMID: 2277635
-
Molecular and genetic characterization of two pollen-expressed genes that have sequence similarity to pectate lyases of the plant pathogen Erwinia.
Plant Mol Biol. 1990 Jan;14(1):17-28
PMID: 1983191
-
Structure of two pectate lyase genes from Erwinia chrysanthemi EC16 and their high-level expression in Escherichia coli.
J Bacteriol. 1986 Nov;168(2):595-606
PMID: 3536853