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PMID: 12963376 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Essential role of histidine 84 in elongation factor Tu for the chemical step of GTP hydrolysis on the ribosome.

Journal of molecular biology ·Vol. 332 ·No. 3 ·2003-09-19 ·Pages 689-99

Daviter T, Wieden HJ, Rodnina MV

Abstract

Elongation factor Tu (EF-Tu) is a GTP-binding protein that delivers aminoacyl-tRNA to the A site of the ribosome during protein synthesis. The mechanism of GTP hydrolysis in EF-Tu on the ribosome is poorly understood. It is known that mutations of a conserved histidine residue in the switch II region of the factor, His84 in Escherichia coli EF-Tu, impair GTP hydrolysis. However, the partial reaction which is directly affected by mutations of His84 was not identified and the effect on GTP hydrolysis was not quantified. Here, we show that the replacement of His84 with Ala reduces the rate constant of GTP hydrolysis more than 10(6)-fold, whereas the preceding steps of ternary complex binding to the ribosome, codon recognition and, most importantly, the GTPase activation step are affected only slightly. These results show that His84 plays a key role in the chemical step of GTP hydrolysis. Rate constants of GTP hydrolysis by wild-type EF-Tu, measured using the slowly hydrolyzable GTP analog, GTPgammaS, showed no dependence on pH, indicating that His84 does not act as a general base. We propose that the catalytic role of His84 is to stabilize the transition state of GTP hydrolysis by hydrogen bonding to the attacking water molecule or, possibly, the gamma-phosphate group of GTP.

MeSH Terms
Binding Sites Guanosine 5'-O-(3-Thiotriphosphate)/metabolism Guanosine Triphosphate/chemistry,metabolism Histidine/chemistry,genetics Hydrogen-Ion Concentration Hydrolysis Kinetics Macromolecular Substances Peptide Elongation Factor Tu/chemistry,genetics,metabolism Peptides/chemistry,metabolism Protein Biosynthesis RNA, Transfer, Phe/metabolism Ribosomes/chemistry,genetics,metabolism
Chemicals
Macromolecular Substances Peptides RNA, Transfer, Phe Guanosine 5'-O-(3-Thiotriphosphate) Histidine Guanosine Triphosphate Peptide Elongation Factor Tu
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Daviter Tina
Institute of Physical Biochemistry, University of Witten/Herdecke, Stockumer Strasse 10, 58448, Witten, Germany
Wieden Hans-Joachim
Rodnina Marina V
Article Info
Journal
Journal of molecular biology
Abbr.
J Mol Biol
ISSN
0022-2836
Published
2003-09-19
Pages
689-99
Language
English
Region
England
NLM ID
2985088R
Subset
IM
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