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PMID: 12907670 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

The structure of 4-hydroxybenzoyl-CoA thioesterase from arthrobacter sp. strain SU.

The Journal of biological chemistry ·Vol. 278 ·No. 44 ·2003-10-31 ·Pages 43709-16

Thoden JB, Zhuang Z, Dunaway-Mariano D, Holden HM

Abstract

The 4-chlorobenzoyl-CoA dehalogenation pathway in certain Arthrobacter and Pseudomonas bacterial species contains three enzymes: a ligase, a dehalogenase, and a thioesterase. Here we describe the high resolution x-ray crystallographic structure of the 4-hydroxybenzoyl-CoA thioesterase from Arthrobacter sp. strain SU. The tetrameric enzyme is a dimer of dimers with each subunit adopting the so-called "hot dog fold" composed of six strands of anti-parallel beta-sheet flanked on one side by a rather long alpha-helix. The dimers come together to form the tetramer with their alpha-helices facing outwards. This quaternary structure is in sharp contrast to that previously observed for the 4-hydroxybenzoyl-CoA thioesterase from Pseudomonas species strain CBS-3, whereby the dimers forming the tetramer pack with their alpha-helices projecting toward the interfacial region. In the Arthrobacter thioesterase, each of the four active sites is formed by three of the subunits of the tetramer. On the basis of both structural and kinetic data, it appears that Glu73 is the active site base in the Arthrobacter thioesterase. Remarkably, this residue is located on the opposite side of the substrate-binding pocket compared with that observed for the Pseudomonas enzyme. Although these two bacterial thioesterases demonstrate equivalent catalytic efficiencies, substrate specificities, and metabolic functions, their quaternary structures, CoA-binding sites, and catalytic platforms are decidedly different.

MeSH Terms
Arthrobacter/enzymology Binding Sites Catalysis Crystallography, X-Ray Dimerization Hydrolysis Kinetics Models, Chemical Models, Molecular Protein Binding Protein Conformation Protein Folding Protein Structure, Quaternary Protein Structure, Secondary Pseudomonas/enzymology Thiolester Hydrolases/chemistry
Chemicals
4-hydroxybenzoyl-CoA hydrolase Thiolester Hydrolases
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Thoden James B
Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706-1544, USA.
Zhuang Zhihao
Dunaway-Mariano Debra
Holden Hazel M
Article Info
Journal
The Journal of biological chemistry
Abbr.
J Biol Chem
ISSN
0021-9258
Published
2003-10-31
Epub
2003-00-07
Pages
43709-16
Language
English
Region
United States
NLM ID
2985121R
Subset
IM
Grants
NIGMS NIH HHS · GM28688 · United States
NIGMS NIH HHS · GM55513 · United States
Databases
OMIM
1Q4U
PDB
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