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PMID: 12882173 Published · ppublish English Comparative Study Journal Article

Archaeal community compositions at different depths (up to 30 m) of a municipal solid waste landfill in Taiwan as revealed by 16S rDNA cloning analyses.

Biotechnology letters ·Vol. 25 ·No. 9 ·2003-05-00 ·Pages 719-24

Chen AC, Imachi H, Sekiguchi Y, Ohashi A, Harada H

Abstract

Archaeal 16S rDNA clone libraries were constructed for samples taken at 10, 20 and 30 m depth in a landfill, which corresponded approximately 3, 6 and 9 years operation, respectively. Sequencing and phylogenetic analyses of representative clones showed that all of the rDNAs were closely related to typical methanogens. The distributions of phylotypes in clone libraries were similar to each other. Dominant clones in all the clone libraries were closely related to thermophilic species, such as Methanothermobacter thermautotrophicus, suggesting that the temperatures at these sites were high. This was supported by the results of H2-dependent methanogenic activity tests, showing that the activities of all samples at 55 degrees C were much higher than those at 25 degrees C.

MeSH Terms
Acetates/metabolism Archaea/classification,genetics,isolation & purification,metabolism Biodegradation, Environmental Cities Cloning, Molecular/methods DNA, Archaeal/chemistry,genetics Euryarchaeota/classification,genetics,isolation & purification Gene Expression Regulation, Archaeal Genetic Variation Hydrogen/analysis,metabolism Methane/analysis,metabolism Phylogeny RNA, Ribosomal, 16S/genetics Refuse Disposal Sequence Alignment/methods Sequence Analysis, DNA/methods Soil/analysis Soil Microbiology Taiwan
Chemicals
Acetates DNA, Archaeal RNA, Ribosomal, 16S Soil Hydrogen Methane
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Chen Ann-Cheng
Department of Environmental Systems Engineering, Nagaoka University of Technology, Nagaoka, Niigata 940-2188, Japan. chacha@mail.chna.edu.tw
Imachi Hiroyuki
Sekiguchi Yuji
Ohashi Akiyoshi
Harada Hideki
Article Info
Journal
Biotechnology letters
Abbr.
Biotechnol Lett
ISSN
0141-5492
Published
2003-05-00
Pages
719-24
Language
English
Region
Netherlands
NLM ID
8008051
Subset
IM
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