Abstract
Phytochrome-mediated perception of the ratio of red to far-red wavelengths in the ambient light environment is fundamental to plant growth and development. Such monitoring enables plants to detect neighboring vegetation and initiate avoidance responses, thus conferring considerable selective advantage. The shade avoidance syndrome in plants is characterized by elongation growth and early flowering, responses that are fully induced by end-of-day far-red light treatments. Elucidating the roles of individual phytochromes in mediating responses to red to far-red has however always been confounded by synergistic and mutually antagonistic coactions between family members. The creation of triple and quadruple mutants in Arabidopsis, deficient in multiple phytochromes, has revealed functional redundancy between phyB, D, and E in controlling flowering time, leaf development, and regulation of the homeobox gene, ATHB-2. In addition, mutant analysis suggests a possible novel role for phyC in suppressing ATHB-2 transcription in the light.
MeSH Terms
Apoproteins/physiology
Arabidopsis/genetics,growth & development,radiation effects
Arabidopsis Proteins/genetics,metabolism,physiology
Cotyledon/growth & development,radiation effects
DNA-Binding Proteins/genetics,metabolism
Drug Synergism
Flowers/growth & development,radiation effects
Homeodomain Proteins
Light
Mutation
Photoreceptor Cells
Phytochrome/physiology
Phytochrome A
Phytochrome B
Plant Leaves/growth & development,radiation effects
Transcription Factors
Transcriptional Activation/physiology
Chemicals
Apoproteins
Arabidopsis Proteins
DNA-Binding Proteins
HB-2 protein, Arabidopsis
Homeodomain Proteins
PHYA protein, Arabidopsis
PHYB protein, Arabidopsis
Phytochrome A
Transcription Factors
phytochrome C, Arabidopsis
phytochrome E
Phytochrome
Phytochrome B
PHYD protein, Arabidopsis
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Franklin Keara A
Department of Biology, University of Leicester, United Kingdom LE1 7RH. kaf5@le.ac.uk
Praekelt Uta
Stoddart Wendy M
Billingham Olivia E
Halliday Karen J
Whitelam Garry C
References (31)
31 references, click to expand
-
Shade avoidance responses are mediated by the ATHB-2 HD-zip protein, a negative regulator of gene expression.
Development. 1999 Oct;126(19):4235-45
PMID: 10477292
-
Far-red radiation reflected from adjacent leaves: an early signal of competition in plant canopies.
Science. 1990 Jan 19;247(4940):329-32
PMID: 17735851
-
Functional interaction of cryptochrome 1 and phytochrome D
Plant J. 1999 Nov;20(3):289-94
PMID: 10571889
-
The phytochrome apoprotein family in Arabidopsis is encoded by five genes: the sequences and expression of PHYD and PHYE.
Plant Mol Biol. 1994 Jun;25(3):413-27
PMID: 8049367
-
Twilight-zone and canopy shade induction of the Athb-2 homeobox gene in green plants.
Proc Natl Acad Sci U S A. 1996 Apr 16;93(8):3530-5
PMID: 11607652
-
Improved method for the isolation of RNA from plant tissues.
Anal Biochem. 1987 May 15;163(1):16-20
PMID: 2441623
-
Phytochrome E controls light-induced germination of Arabidopsis.
Plant Physiol. 2002 Jan;128(1):194-200
PMID: 11788765
-
Phytochromes and light signal perception by plants--an emerging synthesis.
Nature. 2000 Oct 5;407(6804):585-91
PMID: 11034200
-
Phytochrome control of flowering is temperature sensitive and correlates with expression of the floral integrator FT.
Plant J. 2003 Mar;33(5):875-85
PMID: 12609029
-
Phytochrome A null mutants of Arabidopsis display a wild-type phenotype in white light.
Plant Cell. 1993 Jul;5(7):757-68
PMID: 8364355
-
Coordination of phytochrome levels in phyB mutants of Arabidopsis as revealed by apoprotein-specific monoclonal antibodies.
Genetics. 1998 Jun;149(2):523-35
PMID: 9611171
-
A novel class of plant proteins containing a homeodomain with a closely linked leucine zipper motif.
EMBO J. 1991 Jul;10(7):1787-91
PMID: 1675603
-
Genetic interactions between phytochrome A, phytochrome B, and cryptochrome 1 during Arabidopsis development.
Plant Physiol. 1998 Sep;118(1):27-35
PMID: 9733523
-
Phytochrome B and at Least One Other Phytochrome Mediate the Accelerated Flowering Response of Arabidopsis thaliana L. to Low Red/Far-Red Ratio.
Plant Physiol. 1994 Apr;104(4):1311-1315
PMID: 12232170
-
Phytochrome D acts in the shade-avoidance syndrome in Arabidopsis by controlling elongation growth and flowering time.
Plant Physiol. 1999 Mar;119(3):909-15
PMID: 10069829
-
When to switch to flowering.
Annu Rev Cell Dev Biol. 1999;15:519-50
PMID: 10611971
-
Regulation of Arabidopsis cryptochrome 2 by blue-light-dependent phosphorylation.
Nature. 2002 Jun 13;417(6890):763-7
PMID: 12066190
-
Photosensory perception and signalling in plant cells: new paradigms?
Curr Opin Cell Biol. 2002 Apr;14(2):180-8
PMID: 11891117
-
Circadian clock-regulated expression of phytochrome and cryptochrome genes in Arabidopsis.
Plant Physiol. 2001 Dec;127(4):1607-16
PMID: 11743105
-
The hy3 Long Hypocotyl Mutant of Arabidopsis Is Deficient in Phytochrome B.
Plant Cell. 1991 Dec;3(12):1263-1274
PMID: 12324590
-
The cucumber long hypocotyl mutant lacks a light-stable PHYB-like phytochrome.
Plant Cell. 1992 Mar;4(3):241-51
PMID: 1498594
-
Mutations in the gene for the red/far-red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development.
Plant Cell. 1993 Feb;5(2):147-57
PMID: 8453299
-
HD-Zip proteins: members of an Arabidopsis homeodomain protein superfamily.
Proc Natl Acad Sci U S A. 1992 May 1;89(9):3894-8
PMID: 1349174
-
The rosette habit of Arabidopsis thaliana is dependent upon phytochrome action: novel phytochromes control internode elongation and flowering time.
Plant J. 1996 Dec;10(6):1127-34
PMID: 9011093
-
Phytochrome A and Phytochrome B Have Overlapping but Distinct Functions in Arabidopsis Development.
Plant Physiol. 1994 Apr;104(4):1139-1149
PMID: 12232154
-
Selected Components of the Shade-Avoidance Syndrome Are Displayed in a Normal Manner in Mutants of Arabidopsis thaliana and Brassica rapa Deficient in Phytochrome B.
Plant Physiol. 1993 Aug;102(4):1179-1184
PMID: 12231894
-
Light-Stimulated Cotyledon Expansion in Arabidopsis Seedlings (The Role of Phytochrome B).
Plant Physiol. 1994 Mar;104(3):1027-1032
PMID: 12232145
-
Far-red light-insensitive, phytochrome A-deficient mutants of tomato.
Mol Gen Genet. 1995 Jan 20;246(2):133-41
PMID: 7862083
-
The Arabidopsis Athb-2 and -4 genes are strongly induced by far-red-rich light.
Plant J. 1993 Sep;4(3):469-79
PMID: 8106086
-
Photophysiology of the Elongated Internode (ein) Mutant of Brassica rapa: ein Mutant Lacks a Detectable Phytochrome B-Like Polypeptide.
Plant Physiol. 1992 Nov;100(3):1442-7
PMID: 16653143
-
Phytochrome E influences internode elongation and flowering time in Arabidopsis.
Plant Cell. 1998 Sep;10(9):1479-87
PMID: 9724694