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PMID: 12504855 Published · ppublish English Journal Article

Mycobacterium bovis BCG cell wall and lipopolysaccharide induce a novel gene, BIGM103, encoding a 7-TM protein: identification of a new protein family having Zn-transporter and Zn-metalloprotease signatures.

Genomics ·Vol. 80 ·No. 6 ·2002-12-00 ·Pages 630-45

Begum NA, Kobayashi M, Moriwaki Y, Matsumoto M, Toyoshima K, Seya T

Abstract

To identify novel genes induced during innate immune activation, we screened a cDNA library prepared from monocytes stimulated with Mycobacterium bovis BCG cell wall. A novel transcript with three-protein coding potential was identified, and the expressed proteins from individual frames showed distinct intracellular localization. Live and heat-killed Mycobacterium, bacterial cell wall, and inflammatory cytokines like TNFalpha were found to be potent inducers of the transcript. Expression of this gene is very low or undetectable in unstimulated monocytes, while a steady expression level was observed during differentiation of monocytes to dendritic cells and macrophages. The entire gene consisted of eight major exons and was localized on chromosome 4q22-q24, spanning approximately 84 kb. The main open reading frame of the transcript encoded a putative seven-transmembrane (TM) protein that showed homology with a number of functionally unknown proteins in the database. Further analysis revealed that all of these proteins have detectable similarity with the ZIP family of metal transporters. In fact, increased accumulation of intracellular Zn(2+) was observed due to the expression of BIGM103 in CHO cells. However, the identified proteins are structurally unique compared to known ZIP members and they also possess the hallmark of Zn-metalloproteases, suggesting a new class of multi-TM protein with dual features. Here we present a collection of these proteins and discuss the functional aspects of BIGM103, based on our results and current findings on two members of the family, Drosophila Catsup and Arabidopsis IAR1.

MeSH Terms
Amino Acid Sequence Animals Base Sequence Blotting, Northern COS Cells Carrier Proteins/genetics Cell Line Cell Wall Skeleton/chemistry,pharmacology Cloning, Molecular DNA, Complementary/chemistry,genetics Dendritic Cells/drug effects,metabolism Exons Female Gene Expression Regulation/drug effects Genes/genetics Green Fluorescent Proteins HeLa Cells Humans Introns Lipopolysaccharides/pharmacology Luminescent Proteins/genetics,metabolism Male Membrane Proteins/genetics Metalloendopeptidases/chemistry,genetics Molecular Sequence Data Monocytes/drug effects,metabolism Mycobacterium bovis/chemistry Phylogeny Recombinant Fusion Proteins/genetics,metabolism Sequence Alignment Sequence Analysis, DNA Sequence Homology, Amino Acid Tumor Cells, Cultured Zinc/chemistry,metabolism
Chemicals
Carrier Proteins Cell Wall Skeleton DNA, Complementary Lipopolysaccharides Luminescent Proteins Membrane Proteins Recombinant Fusion Proteins zinc-binding protein Green Fluorescent Proteins Metalloendopeptidases Zinc
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Begum Nasim A
Department of Immunology, Osaka Medical Center for Cancer and Cardiovascular Diseases, Higashinari-ku, Osaka, 537-8511, Japan.
Kobayashi Mika
Moriwaki Yasuhiro
Matsumoto Misako
Toyoshima Kumao
Seya Tsukasa
Article Info
Journal
Genomics
Abbr.
Genomics
ISSN
0888-7543
Published
2002-12-00
Pages
630-45
Language
English
Region
United States
NLM ID
8800135
Subset
IM
Databases
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