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PMID: 12454646 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S. Review

Post-analysis follow-up and validation of microarray experiments.

Nature genetics ·Vol. 32 Suppl ·2002-12-00 ·Pages 509-14

Chuaqui RF, Bonner RF, Best CJ, Gillespie JW, Flaig MJ, Hewitt SM, Phillips JL, Krizman DB, Tangrea MA, Ahram M, Linehan WM, Knezevic V, Emmert-Buck MR

Abstract

Measurement of gene-expression profiles using microarray technology is becoming increasingly popular among the biomedical research community. Although there has been great progress in this field, investigators are still confronted with a difficult question after completing their experiments: how to validate the large data sets that are generated? This review summarizes current approaches to verifying global expression results, discusses the caveats that must be considered, and describes some methods that are being developed to address outstanding problems.

MeSH Terms
Animals DNA, Complementary/genetics Forecasting Gene Expression Profiling/methods,standards Humans Oligonucleotide Array Sequence Analysis/methods,standards Proteins/genetics Quality Control RNA, Messenger/genetics Reproducibility of Results Sensitivity and Specificity
Chemicals
DNA, Complementary Proteins RNA, Messenger
Authors & Affiliations
13 authors, click to expand affiliations / ORCID
Chuaqui Rodrigo F
Pathogenetics Unit, Laboratory of Pathology and Urologic Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Bonner Robert F
Best Carolyn J M
Gillespie John W
Flaig Michael J
Hewitt Stephen M
Phillips John L
Krizman David B
Tangrea Michael A
Ahram Mamoun
Linehan W Marston
Knezevic Vladimir
Emmert-Buck Michael R
Article Info
Journal
Nature genetics
Abbr.
Nat Genet
ISSN
1061-4036
Published
2002-12-00
Pages
509-14
Language
English
Region
United States
NLM ID
9216904
Subset
IM
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