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PMID: 12045296 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Complexity and species variation of the kidney-type glutaminase gene.

Physiological genomics ·Vol. 9 ·No. 3 ·2002-00-00 ·Pages 157-66

Porter LD, Ibrahim H, Taylor L, Curthoys NP

Abstract

Increased expression of rat kidney-type glutaminase (KGA) during metabolic acidosis results from selective mRNA stabilization. This process is mediated by an 8-base AU-sequence that functions as a pH-response element (pHRE). LLC-PK1-FBPase+ cells, a pH-responsive porcine kidney cell line, express four distinct GA mRNAs. RNase H mapping indicated that three of the GA mRNAs are generated by use of alternative polyadenylation sites and are homologs of the rat KGA mRNA, while the fourth contains a different COOH-terminal coding and 3'-untranslated sequence. PCR cloning and sequencing established that the latter GA mRNA is the homolog of the human GAC mRNA. A rat GAC cDNA was also cloned from a rat kidney library. The 3'-untranslated regions of the GAC mRNAs, but not the porcine or human KGA mRNAs, contain identifiable pHREs. The human KGA gene spans 82 kb and is composed of 19 exons. The unique sequence from the hGAC cDNA is contained in a single exon. Thus in humans, alternative splicing of the initial transcript could produce two GA mRNAs, only one of which may be increased during acidosis.

MeSH Terms
Alternative Splicing/genetics Amino Acid Sequence/genetics Animals Base Sequence/genetics Cell Line Databases, Genetic Genetic Variation/genetics Genome Glutaminase/genetics Humans Isoenzymes/genetics Kidney/cytology,enzymology Molecular Sequence Data RNA/metabolism Rats Restriction Mapping/methods Ribonuclease H/metabolism Sequence Analysis, RNA/methods Species Specificity Swine
Chemicals
Isoenzymes RNA Ribonuclease H Glutaminase
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Porter L David
Department of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado 80523-1870, USA.
Ibrahim Hend
Taylor Lynn
Curthoys Norman P
Article Info
Journal
Physiological genomics
Abbr.
Physiol Genomics
ISSN
1531-2267
Published
2002-00-00
Epub
2002-00-16
Pages
157-66
Language
English
Region
United States
NLM ID
9815683
Subset
IM
Grants
NIDDK NIH HHS · DK-37124 · United States
Databases
GENBANK
AF490841, AY083459
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