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PMID: 11823181 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Bacteria associated with hazelnut (Corylus avellana L.) decline are of two groups: Pseudomonas avellanae and strains resembling P. syringae pv. syringae.

Applied and environmental microbiology ·Vol. 68 ·No. 2 ·2002-02-00 ·Pages 476-84

Scortichini M, Marchesi U, Rossi MP, Di Prospero P

Abstract

A total of 118 fluorescent pseudomonads associated with hazelnut decline, which has been occurring for many years in different areas of northern Greece and Italy, were assessed by performing a repetitive PCR analysis with enterobacterial repetitive intergenic consensus, box element, and repetive extragenic palindromic primer sets, sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) of whole-cell protein extracts, a carbon compound utilization analysis, and an analysis to determine the presence of the syrB gene. A subset of 53 strains was also characterized by amplified 16S ribosomal DNA restriction analysis (ARDRA) by using nine restriction endonucleases. The virulence of 40 representative strains was assessed by using serial doses. The pathogenic specificities of the strains were also verified. ARDRA carried out with HinfI revealed two main groups of strains, groups A and B, which exhibited a level of similarity of 57%. The other eight restriction endonucleases used did not separate the strains. In addition, a cluster analysis performed by the unweighted pair group method using arithmetic averages after repetitive PCR and SDS-PAGE of protein extracts also revealed the same two groups. Furthermore, the differential utilization of some carbon compounds made it possible to differentiate the groups. Virulence assessment clearly indicated that the group A strains are very virulent, whereas the group B strains proved to be mildly virulent for hazelnut. Group A included the strains isolated in northern Greece and central Italy (i.e., the province of Viterbo); these strains do not have the syrB gene, are pathogenically restricted to Corylus avellana, and belong to Pseudomonas avellanae. Group B includes the other strains obtained from hazelnut cultivated in Piedmont, Campania, Latium, Sicily, and Sardinia. They represent a distinct taxon closely related to Pseudomonas syringae pv. syringae.

MeSH Terms
Bacterial Proteins/chemistry,genetics Bacterial Typing Techniques Betulaceae/microbiology DNA Fingerprinting/methods Greece Italy Nuts Peptide Synthases Plant Diseases/microbiology Polymerase Chain Reaction Pseudomonas/classification,genetics,isolation & purification,metabolism,pathogenicity Restriction Mapping Trees/microbiology Virulence
Chemicals
Bacterial Proteins Peptide Synthases SYRB1 protein, Pseudomonas syringae
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Scortichini Marco
Istituto Sperimentale per la Frutticoltura, Via di Fioranello, 52 I-00040 Ciampino Aeroporto, Rome, Italy. mscortichini@hotmail.com
Marchesi Ugo
Rossi Maria Pia
Di Prospero Paola
References (11)
11 references, click to expand
  1. Genetic diversity and biological control activity of novel species of closely related pseudomonads isolated from wheat field soils in South Australia.
    Appl Environ Microbiol. 2000 Apr;66(4):1609-16 PMID: 10742249
  2. Pseudomonas brassicacearum sp. nov. and Pseudomonas thivervalensis sp. nov., two root-associated bacteria isolated from Brassica napus and Arabidopsis thaliana.
    Int J Syst Evol Microbiol. 2000 Jan;50 Pt 1:9-18 PMID: 10826782
  3. How clonal are bacteria?
    Proc Natl Acad Sci U S A. 1993 May 15;90(10):4384-8 PMID: 8506277
  4. Rapid identification of bacteria of the Comamonadaceae with amplified ribosomal DNA-restriction analysis (ARDRA).
    FEMS Microbiol Lett. 1992 Jun 15;72(3):227-33 PMID: 1354195
  5. PCR Detection of Cyclic Lipodepsinonapeptide-Producing Pseudomonas syringae pv. syringae and Similarity of Strains.
    Appl Environ Microbiol. 1998 Jan;64(1):226-30 PMID: 16349482
  6. Frequency and biodiversity of 2,4-diacetylphloroglucinol-producing bacteria isolated from the maize rhizosphere at different stages of plant growth.
    Appl Environ Microbiol. 2000 Mar;66(3):948-55 PMID: 10698757
  7. Two simple media for the demonstration of pyocyanin and fluorescin.
    J Lab Clin Med. 1954 Aug;44(2):301-7 PMID: 13184240
  8. Specific genomic fingerprints of phytopathogenic Xanthomonas and Pseudomonas pathovars and strains generated with repetitive sequences and PCR.
    Appl Environ Microbiol. 1994 Jul;60(7):2286-95 PMID: 8074510
  9. Fluorescent Pseudomonas species categorized by using polymerase chain reaction (PCR)/restriction fragment analysis of 16S rDNA.
    Mol Ecol. 1994 Oct;3(5):479-87 PMID: 7952328
  10. Identification of Azospirillum strains by restriction fragment length polymorphism of the 16S rDNA and of the histidine operon.
    FEMS Microbiol Lett. 1995 Mar 15;127(1-2):85-91 PMID: 7737487
  11. Genetic diversity of Burkholderia solanacearum (synonym Pseudomonas solanacearum) race 3 in Kenya.
    Appl Environ Microbiol. 1995 Dec;61(12):4263-8 PMID: 8534093
Article Info
Journal
Applied and environmental microbiology
Abbr.
Appl Environ Microbiol
ISSN
0099-2240
Published
2002-02-00
Pages
476-84
Language
English
Region
United States
NLM ID
7605801
PMCID
PMC126672
Subset
IM
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