Abstract
Femtosecond time-resolved transient absorption spectroscopy was employed to characterize for the first time the primary photoisomerization dynamics of a bacterial phytochrome system in the two thermally stable states of the photocycle. The 85-kDa phytochrome Cph1 from the cyanobacterium Synechocystis PCC 6803 expressed in Escherichia coli was reconstituted with phycocyanobilin (Cph1-PCB) and phycoerythrobilin (Cph1-PEB). The red-light-absorbing form Pr of Cph1-PCB shows an approximately 150 fs relaxation in the S(1) state after photoexcitation at 650 nm. The subsequent Z-E isomerization between rings C and D of the linear tetrapyrrole-chromophore is best described by a distribution of rate constants with the first moment at (16 ps)(-1). Excitation at 615 nm leads to a slightly broadened distribution. The reverse E-Z isomerization, starting from the far-red-absorbing form Pfr, is characterized by two shorter time constants of 0.54 and 3.2 ps. In the case of Cph1-PEB, double-bond isomerization does not take place, and the excited-state lifetime extends into the nanosecond regime. Besides a stimulated emission rise time between 40 and 150 fs, no fast relaxation processes are observed. This suggests that the chromophore-protein interaction along rings A, B, and C does not contribute much to the picosecond dynamics observed in Cph1-PCB but rather the region around ring D near the isomerizing C(15) [double bond] C(16) double bond. The primary reaction dynamics of Cph1-PCB at ambient temperature is found to exhibit very similar features as those described for plant type A phytochrome, i.e., a relatively slow Pr, and a fast Pfr, photoreaction. This suggests that the initial reactions were established already before evolution of plant phytochromes began.
MeSH Terms
Biophysical Phenomena
Biophysics
Carbon/chemistry
Cyanobacteria/chemistry
Cysteine/chemistry
Escherichia coli/metabolism
Kinetics
Light
Models, Chemical
Models, Statistical
Phycobilins
Phycocyanin/chemistry
Phycoerythrin/chemistry
Phytochrome/chemistry
Plants/metabolism
Protein Conformation
Pyrroles/chemistry
Spectrophotometry
Tetrapyrroles
Time Factors
Chemicals
Phycobilins
Pyrroles
Tetrapyrroles
Phycocyanin
Phycoerythrin
Phytochrome
phycoerythrobilin
phycocyanobilin
Carbon
Cysteine
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Heyne Karsten
Institut für Experimentalphysik, Freie Universität Berlin, Germany.
Herbst Johannes
Stehlik Dietmar
Esteban Berta
Lamparter Tilman
Hughes Jon
Diller Rolf
References (27)
27 references, click to expand
-
Prokaryotes and phytochrome. The connection to chromophores and signaling
Plant Physiol. 1999 Dec;121(4):1059-68
PMID: 10594094
-
A prokaryotic phytochrome.
Nature. 1997 Apr 17;386(6626):663
PMID: 9109482
-
Resonance raman analysis of chromophore structure in the lumi-R photoproduct of phytochrome.
Biochemistry. 1996 Dec 17;35(50):15997-6008
PMID: 8973170
-
The photoreactions of recombinant phytochrome from the cyanobacterium Synechocystis: a low-temperature UV-Vis and FT-IR spectroscopic study.
Photochem Photobiol. 2000 May;71(5):655-61
PMID: 10818798
-
Recombinant phytochrome of the moss Ceratodon purpureus: heterologous expression and kinetic analysis of Pr-->Pfr conversion.
Photochem Photobiol. 1998 Dec;68(6):857-63
PMID: 9867036
-
Characterization of recombinant phytochrome from the cyanobacterium Synechocystis.
Proc Natl Acad Sci U S A. 1997 Oct 28;94(22):11792-7
PMID: 9342316
-
Ultrafast pump-probe spectroscopy of native etiolated oat phytochrome.
Biochemistry. 1993 Jul 27;32(29):7512-8
PMID: 8338849
-
Vibrationally coherent photochemistry in the femtosecond primary event of vision.
Science. 1994 Oct 21;266(5184):422-4
PMID: 7939680
-
Phytochrome Cph1 from the cyanobacterium Synechocystis PCC6803. Purification, assembly, and quaternary structure.
Eur J Biochem. 2001 Sep;268(17):4720-30
PMID: 11532008
-
Chromophore-protein interaction controls the complexity of the phytochrome photocycle.
J Photochem Photobiol B. 1996 Jun;34(1):73-7
PMID: 8765662
-
Fourier-transform resonance Raman spectroscopy of intermediates of the phytochrome photocycle.
Biochemistry. 1995 Aug 22;34(33):10497-507
PMID: 7654704
-
Fourier-transform infrared spectroscopy of phytochrome: difference spectra of the intermediates of the photoreactions.
Biochemistry. 1996 Aug 20;35(33):10793-9
PMID: 8718870
-
Characterization of the Cph1 holo-phytochrome from Synechocystis sp. PCC 6803.
Eur J Biochem. 2001 Apr;268(7):2055-63
PMID: 11277928
-
Dynamics of ligand binding to myoglobin.
Biochemistry. 1975 Dec 2;14(24):5355-73
PMID: 1191643
-
Fluorescence and photochemistry of recombinant phytochrome from the cyanobacterium Synechocystis.
Photochem Photobiol. 1998 Feb;67(2):263-7
PMID: 9487803
-
First steps in the phytochrome phototransformation: a comparative femtosecond study on the forward (Pr --> Pfr) and back reaction (Pfr --> Pr).
Biochemistry. 2001 Jan 9;40(1):181-6
PMID: 11141069
-
Phytochromes: photosensory perception and signal transduction.
Science. 1995 May 5;268(5211):675-80
PMID: 7732376
-
Chromophore structure of the physiologically active form (P(fr)) of phytochrome.
Proc Natl Acad Sci U S A. 1983 Oct;80(20):6244-8
PMID: 16593380
-
A cyanobacterial phytochrome two-component light sensory system.
Science. 1997 Sep 5;277(5331):1505-8
PMID: 9278513
-
From seed germination to flowering, light controls plant development via the pigment phytochrome.
Proc Natl Acad Sci U S A. 1996 Oct 29;93(22):12066-71
PMID: 8901532
-
Rate theories and puzzles of hemeprotein kinetics.
Science. 1985 Jul 26;229(4711):337-45
PMID: 4012322
-
Protein catalysis of the retinal subpicosecond photoisomerization in the primary process of bacteriorhodopsin photosynthesis.
Science. 1993 Aug 13;261(5123):891-4
PMID: 17783735
-
Phytochromes. Tripping the light fantastic.
Nature. 1999 Aug 19;400(6746):710-1, 713
PMID: 10466717
-
The phytofluors: a new class of fluorescent protein probes.
Curr Biol. 1997 Nov 1;7(11):870-6
PMID: 9382811
-
Electrochromic detection of a coherent component in the formation of the charge pair P(+)H(L)(-) in bacterial reaction centers.
Biochemistry. 2000 Jul 25;39(29):8353-61
PMID: 10913241
-
Raman spectroscopic and light-induced kinetic characterization of a recombinant phytochrome of the cyanobacterium Synechocystis.
Biochemistry. 1997 Oct 28;36(43):13389-95
PMID: 9341232
-
Continuous fluorescence assay of phytochrome assembly in vitro.
Biochemistry. 1995 Jun 20;34(24):7923-30
PMID: 7794904