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PMID: 11751321 Published · ppublish English Journal Article

Salt-induced conformation and interaction changes of nucleosome core particles.

Biophysical journal ·Vol. 82 ·No. 1 Pt 1 ·2002-01-00 ·Pages 345-56

Mangenot S, Leforestier A, Vachette P, Durand D, Livolant F

Abstract

Small angle x-ray scattering was used to follow changes in the conformation and interactions of nucleosome core particles (NCP) as a function of the monovalent salt concentration C(s). The maximal extension (D(max)) of the NCP (145 +/- 3-bp DNA) increases from 137 +/- 5 A to 165 +/- 5 A when C(s) rises from 10 to 50 mM and remains constant with further increases of C(s) up to 200 mM. In view of the very weak increase of the R(g) value in the same C(s) range, we attribute this D(max) variation to tail extension, a proposal confirmed by simulations of the entire I(q) curves, considering an ideal solution of particles with tails either condensed or extended. This tail extension is observed at higher salt values when particles contain longer DNA fragments (165 +/- 10 bp). The maximal extension of the tails always coincides with the screening of repulsive interactions between particles. The second virial coefficient becomes smaller than the hard sphere virial coefficient and eventually becomes negative (net attractive interactions) for NCP(145). Addition of salt simultaneously screens Coulombic repulsive interactions between NCP and Coulombic attractive interactions between tails and DNA inside the NCP. We discuss how the coupling of these two phenomena may be of biological relevance.

MeSH Terms
Animals Cattle Chickens DNA/chemistry Erythrocytes/ultrastructure Models, Molecular Nucleic Acid Conformation Nucleosomes/chemistry,ultrastructure Protein Conformation Salts Scattering, Radiation Thymus Gland/ultrastructure X-Ray Diffraction X-Rays
Chemicals
Nucleosomes Salts DNA
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Mangenot Stéphanie
Laboratoire de Physique des Solides, Bât 510, Université Paris-Sud, 91405 Orsay Cedex, France.
Leforestier Amélie
Vachette Patrice
Durand Dominique
Livolant Françoise
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Article Info
Journal
Biophysical journal
Abbr.
Biophys J
ISSN
0006-3495
Published
2002-01-00
Pages
345-56
Language
English
Region
United States
NLM ID
0370626
PMCID
PMC1302474
Subset
IM
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