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PMID: 11751232 Published · ppublish English Journal Article

MELTING, computing the melting temperature of nucleic acid duplex.

Bioinformatics (Oxford, England) ·Vol. 17 ·No. 12 ·2001-12-00 ·Pages 1226-7

Le Novère N

Abstract

MELTING computes the enthalpy and entropy of an oligonucleotide duplex helix-coil transition, and then its melting temperature. The program uses the method of nearest-neighbours. The set of thermodynamic parameters can be easily customized. The program provides several correction methods for the concentration of salt. MELTING is a free program, available at no cost and open-source. Perl scripts are provided to show how MELTING can be used to construct more ambitious programs. MELTING is available for several platforms (http://www.pasteur.fr/recherche/unites/neubiomol/meltinghome.html) and is accessible via a www server (http://bioweb.pasteur.fr/seqanal/interfaces/melting.html). nl223@cus.cam.ac.uk

MeSH Terms
Mathematical Computing Nucleic Acids/chemistry Software Temperature Thermodynamics
Chemicals
Nucleic Acids
Authors & Affiliations
1 authors, click to expand affiliations / ORCID
Le Novère N
Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, UK. nl223@cus.cam.ac.uk
Article Info
Journal
Bioinformatics (Oxford, England)
Abbr.
Bioinformatics
ISSN
1367-4803
Published
2001-12-00
Pages
1226-7
Language
English
Region
England
NLM ID
9808944
Subset
IM
Analysis Services
Analysis Services

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