Abstract
We have used the yeast two-hybrid system to analyze protein-protein interactions mediated by domains of regulatory proteins of the ntr signal transduction system, including interactions among NtrB derivatives and their interactions with NtrC and PII from Klebsiella pneumoniae. Interactions took place only between proteins or protein domains belonging to the ntr signal transduction system and not between proteins or domains from noncognate regulators. NtrB and its transmitter domain, but not NtrC, CheA, or the cytoplasmic C terminus of EnvZ, interacted with PII. In addition, interaction of NtrB with NtrC, but not with PII, depended on the histidine phosphotransfer domain. Point mutation A129T, diminishing the NtrC phosphatase activity of NtrB, affected the strength of the signals between NtrC and the transmitter module of NtrB but had no impact on PII signals, suggesting that A129T prevents the conformational change needed by NtrB to function as a phosphatase for NtrC, rather than disturbing binding to PII.
MeSH Terms
Bacterial Proteins
Catalytic Domain
DNA-Binding Proteins/metabolism
Histidine Kinase
Klebsiella pneumoniae/metabolism
Mutation
Nucleotidyltransferases/metabolism
PII Nitrogen Regulatory Proteins
Phosphoprotein Phosphatases/genetics,metabolism
Protein Binding
Protein Kinases/genetics,metabolism
Protein Structure, Tertiary
Sequence Deletion
Signal Transduction
Trans-Activators
Transcription Factors
Two-Hybrid System Techniques
Chemicals
Bacterial Proteins
DNA-Binding Proteins
PII Nitrogen Regulatory Proteins
Trans-Activators
Transcription Factors
Protein Kinases
Histidine Kinase
protein kinase-phosphatase NTRB
Nucleotidyltransferases
regulatory protein uridylyltransferase
Phosphoprotein Phosphatases
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Martínez-Argudo Isabel
División de Genética, Universidad de Alicante, Apartado 99, E-03080 Alicante, Spain.
Salinas Paloma
Maldonado Rafael
Contreras Asunción
References (31)
31 references, click to expand
-
Inhibition of the FixL sensor kinase by the FixT protein in Sinorhizobium meliloti.
J Biol Chem. 1999 Nov 5;274(45):32500-6
PMID: 10542296
-
Elimination of false positives that arise in using the two-hybrid system.
Biotechniques. 1993 Jun;14(6):920-4
PMID: 8333960
-
Phosphatase activity of histidine kinase EnvZ without kinase catalytic domain.
Proc Natl Acad Sci U S A. 2000 Jul 5;97(14):7808-13
PMID: 10884412
-
Functional dissection of the dimerization and enzymatic activities of Escherichia coli nitrogen regulator II and their regulation by the PII protein.
Biochemistry. 2000 Nov 7;39(44):13433-49
PMID: 11063580
-
The Escherichia coli PII signal transduction protein regulates the activities of the two-component system transmitter protein NRII by direct interaction with the kinase domain of the transmitter module.
Biochemistry. 2000 Nov 7;39(44):13450-61
PMID: 11063581
-
P(II) signal transduction proteins, pivotal players in microbial nitrogen control.
Microbiol Mol Biol Rev. 2001 Mar;65(1):80-105
PMID: 11238986
-
The p21 Cdk-interacting protein Cip1 is a potent inhibitor of G1 cyclin-dependent kinases.
Cell. 1993 Nov 19;75(4):805-16
PMID: 8242751
-
Three-dimensional solution structure of the N-terminal receiver domain of NTRC.
Biochemistry. 1995 Jan 31;34(4):1413-24
PMID: 7827089
-
Nitrogen control in bacteria.
Microbiol Rev. 1995 Dec;59(4):604-22
PMID: 8531888
-
An in vitro assay of beta-galactosidase from yeast.
Biotechniques. 1996 Jun;20(6):960-2
PMID: 8780862
-
Refinement of vectors for use in the yeast two-hybrid system.
Anal Biochem. 1996 Oct 15;241(2):260-2
PMID: 8921196
-
Phosphoprotein PII from cyanobacteria--analysis of functional conservation with the PII signal-transduction protein from Escherichia coli.
Eur J Biochem. 1997 Mar 15;244(3):869-75
PMID: 9108259
-
Compilation of all genes encoding two-component phosphotransfer signal transducers in the genome of Escherichia coli.
DNA Res. 1997 Apr 28;4(2):161-8
PMID: 9205844
-
Mutational analysis of the linker region of EnvZ, an osmosensor in Escherichia coli.
J Bacteriol. 1997 Jul;179(13):4382-90
PMID: 9209057
-
Computational learning reveals coiled coil-like motifs in histidine kinase linker domains.
Proc Natl Acad Sci U S A. 1998 Mar 17;95(6):2738-43
PMID: 9501159
-
Specificity of the BvgAS and EvgAS phosphorelay is mediated by the C-terminal HPt domains of the sensor proteins.
Mol Microbiol. 1998 Mar;27(5):875-87
PMID: 9535079
-
Two-domain reconstitution of a functional protein histidine kinase.
Proc Natl Acad Sci U S A. 1998 Jun 9;95(12):6728-32
PMID: 9618480
-
NMR structure of the histidine kinase domain of the E. coli osmosensor EnvZ.
Nature. 1998 Nov 5;396(6706):88-92
PMID: 9817206
-
Functional dissection of the transmitter module of the histidine kinase NtrB in Escherichia coli.
Proc Natl Acad Sci U S A. 1999 Jan 19;96(2):604-9
PMID: 9892680
-
Structure of CheA, a signal-transducing histidine kinase.
Cell. 1999 Jan 8;96(1):131-41
PMID: 9989504
-
Regulation of autophosphorylation of Escherichia coli nitrogen regulator II by the PII signal transduction protein.
J Bacteriol. 1999 Mar;181(6):1906-11
PMID: 10074086
-
PAS domains: internal sensors of oxygen, redox potential, and light.
Microbiol Mol Biol Rev. 1999 Jun;63(2):479-506
PMID: 10357859
-
Solution structure of the homodimeric core domain of Escherichia coli histidine kinase EnvZ.
Nat Struct Biol. 1999 Aug;6(8):729-34
PMID: 10426948
-
Conservation of structure and function among histidine-containing phosphotransfer (HPt) domains as revealed by the crystal structure of YPD1.
J Mol Biol. 1999 Oct 8;292(5):1039-50
PMID: 10512701
-
Two-hybrid analysis of domain interactions involving NtrB and NtrC two-component regulators.
Mol Microbiol. 2001 Apr;40(1):169-78
PMID: 11298284
-
Histidine kinases and response regulator proteins in two-component signaling systems.
Trends Biochem Sci. 2001 Jun;26(6):369-76
PMID: 11406410
-
Crystal structure of the CheA histidine phosphotransfer domain that mediates response regulator phosphorylation in bacterial chemotaxis.
J Biol Chem. 2001 Aug 17;276(33):31074-82
PMID: 11387324
-
The Q-linker: a class of interdomain sequences found in bacterial multidomain regulatory proteins.
Protein Eng. 1989 May;2(7):535-43
PMID: 2664763
-
The two-hybrid system: a method to identify and clone genes for proteins that interact with a protein of interest.
Proc Natl Acad Sci U S A. 1991 Nov 1;88(21):9578-82
PMID: 1946372
-
Characterization of Escherichia coli glnL mutations affecting nitrogen regulation.
J Bacteriol. 1992 Jul;174(14):4538-48
PMID: 1352516
-
Structure of a transiently phosphorylated switch in bacterial signal transduction.
Nature. 1999 Dec 23-30;402(6764):894-8
PMID: 10622255