Home LiteratureArticle Details
PMID: 11741861 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Domain interactions on the ntr signal transduction pathway: two-hybrid analysis of mutant and truncated derivatives of histidine kinase NtrB.

Journal of bacteriology ·Vol. 184 ·No. 1 ·2002-01-00 ·Pages 200-6

Martínez-Argudo I, Salinas P, Maldonado R, Contreras A

Abstract

We have used the yeast two-hybrid system to analyze protein-protein interactions mediated by domains of regulatory proteins of the ntr signal transduction system, including interactions among NtrB derivatives and their interactions with NtrC and PII from Klebsiella pneumoniae. Interactions took place only between proteins or protein domains belonging to the ntr signal transduction system and not between proteins or domains from noncognate regulators. NtrB and its transmitter domain, but not NtrC, CheA, or the cytoplasmic C terminus of EnvZ, interacted with PII. In addition, interaction of NtrB with NtrC, but not with PII, depended on the histidine phosphotransfer domain. Point mutation A129T, diminishing the NtrC phosphatase activity of NtrB, affected the strength of the signals between NtrC and the transmitter module of NtrB but had no impact on PII signals, suggesting that A129T prevents the conformational change needed by NtrB to function as a phosphatase for NtrC, rather than disturbing binding to PII.

MeSH Terms
Bacterial Proteins Catalytic Domain DNA-Binding Proteins/metabolism Histidine Kinase Klebsiella pneumoniae/metabolism Mutation Nucleotidyltransferases/metabolism PII Nitrogen Regulatory Proteins Phosphoprotein Phosphatases/genetics,metabolism Protein Binding Protein Kinases/genetics,metabolism Protein Structure, Tertiary Sequence Deletion Signal Transduction Trans-Activators Transcription Factors Two-Hybrid System Techniques
Chemicals
Bacterial Proteins DNA-Binding Proteins PII Nitrogen Regulatory Proteins Trans-Activators Transcription Factors Protein Kinases Histidine Kinase protein kinase-phosphatase NTRB Nucleotidyltransferases regulatory protein uridylyltransferase Phosphoprotein Phosphatases
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Martínez-Argudo Isabel
División de Genética, Universidad de Alicante, Apartado 99, E-03080 Alicante, Spain.
Salinas Paloma
Maldonado Rafael
Contreras Asunción
References (31)
31 references, click to expand
  1. Inhibition of the FixL sensor kinase by the FixT protein in Sinorhizobium meliloti.
    J Biol Chem. 1999 Nov 5;274(45):32500-6 PMID: 10542296
  2. Elimination of false positives that arise in using the two-hybrid system.
    Biotechniques. 1993 Jun;14(6):920-4 PMID: 8333960
  3. Phosphatase activity of histidine kinase EnvZ without kinase catalytic domain.
    Proc Natl Acad Sci U S A. 2000 Jul 5;97(14):7808-13 PMID: 10884412
  4. Functional dissection of the dimerization and enzymatic activities of Escherichia coli nitrogen regulator II and their regulation by the PII protein.
    Biochemistry. 2000 Nov 7;39(44):13433-49 PMID: 11063580
  5. The Escherichia coli PII signal transduction protein regulates the activities of the two-component system transmitter protein NRII by direct interaction with the kinase domain of the transmitter module.
    Biochemistry. 2000 Nov 7;39(44):13450-61 PMID: 11063581
  6. P(II) signal transduction proteins, pivotal players in microbial nitrogen control.
    Microbiol Mol Biol Rev. 2001 Mar;65(1):80-105 PMID: 11238986
  7. The p21 Cdk-interacting protein Cip1 is a potent inhibitor of G1 cyclin-dependent kinases.
    Cell. 1993 Nov 19;75(4):805-16 PMID: 8242751
  8. Three-dimensional solution structure of the N-terminal receiver domain of NTRC.
    Biochemistry. 1995 Jan 31;34(4):1413-24 PMID: 7827089
  9. Nitrogen control in bacteria.
    Microbiol Rev. 1995 Dec;59(4):604-22 PMID: 8531888
  10. An in vitro assay of beta-galactosidase from yeast.
    Biotechniques. 1996 Jun;20(6):960-2 PMID: 8780862
  11. Refinement of vectors for use in the yeast two-hybrid system.
    Anal Biochem. 1996 Oct 15;241(2):260-2 PMID: 8921196
  12. Phosphoprotein PII from cyanobacteria--analysis of functional conservation with the PII signal-transduction protein from Escherichia coli.
    Eur J Biochem. 1997 Mar 15;244(3):869-75 PMID: 9108259
  13. Compilation of all genes encoding two-component phosphotransfer signal transducers in the genome of Escherichia coli.
    DNA Res. 1997 Apr 28;4(2):161-8 PMID: 9205844
  14. Mutational analysis of the linker region of EnvZ, an osmosensor in Escherichia coli.
    J Bacteriol. 1997 Jul;179(13):4382-90 PMID: 9209057
  15. Computational learning reveals coiled coil-like motifs in histidine kinase linker domains.
    Proc Natl Acad Sci U S A. 1998 Mar 17;95(6):2738-43 PMID: 9501159
  16. Specificity of the BvgAS and EvgAS phosphorelay is mediated by the C-terminal HPt domains of the sensor proteins.
    Mol Microbiol. 1998 Mar;27(5):875-87 PMID: 9535079
  17. Two-domain reconstitution of a functional protein histidine kinase.
    Proc Natl Acad Sci U S A. 1998 Jun 9;95(12):6728-32 PMID: 9618480
  18. NMR structure of the histidine kinase domain of the E. coli osmosensor EnvZ.
    Nature. 1998 Nov 5;396(6706):88-92 PMID: 9817206
  19. Functional dissection of the transmitter module of the histidine kinase NtrB in Escherichia coli.
    Proc Natl Acad Sci U S A. 1999 Jan 19;96(2):604-9 PMID: 9892680
  20. Structure of CheA, a signal-transducing histidine kinase.
    Cell. 1999 Jan 8;96(1):131-41 PMID: 9989504
  21. Regulation of autophosphorylation of Escherichia coli nitrogen regulator II by the PII signal transduction protein.
    J Bacteriol. 1999 Mar;181(6):1906-11 PMID: 10074086
  22. PAS domains: internal sensors of oxygen, redox potential, and light.
    Microbiol Mol Biol Rev. 1999 Jun;63(2):479-506 PMID: 10357859
  23. Solution structure of the homodimeric core domain of Escherichia coli histidine kinase EnvZ.
    Nat Struct Biol. 1999 Aug;6(8):729-34 PMID: 10426948
  24. Conservation of structure and function among histidine-containing phosphotransfer (HPt) domains as revealed by the crystal structure of YPD1.
    J Mol Biol. 1999 Oct 8;292(5):1039-50 PMID: 10512701
  25. Two-hybrid analysis of domain interactions involving NtrB and NtrC two-component regulators.
    Mol Microbiol. 2001 Apr;40(1):169-78 PMID: 11298284
  26. Histidine kinases and response regulator proteins in two-component signaling systems.
    Trends Biochem Sci. 2001 Jun;26(6):369-76 PMID: 11406410
  27. Crystal structure of the CheA histidine phosphotransfer domain that mediates response regulator phosphorylation in bacterial chemotaxis.
    J Biol Chem. 2001 Aug 17;276(33):31074-82 PMID: 11387324
  28. The Q-linker: a class of interdomain sequences found in bacterial multidomain regulatory proteins.
    Protein Eng. 1989 May;2(7):535-43 PMID: 2664763
  29. The two-hybrid system: a method to identify and clone genes for proteins that interact with a protein of interest.
    Proc Natl Acad Sci U S A. 1991 Nov 1;88(21):9578-82 PMID: 1946372
  30. Characterization of Escherichia coli glnL mutations affecting nitrogen regulation.
    J Bacteriol. 1992 Jul;174(14):4538-48 PMID: 1352516
  31. Structure of a transiently phosphorylated switch in bacterial signal transduction.
    Nature. 1999 Dec 23-30;402(6764):894-8 PMID: 10622255
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
2002-01-00
Pages
200-6
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC134775
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com