Home LiteratureArticle Details
PMID: 11726920 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data.

Nature genetics ·Vol. 29 ·No. 4 ·2001-12-00 ·Pages 365-71

Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, Vingron M

Abstract

Microarray analysis has become a widely used tool for the generation of gene expression data on a genomic scale. Although many significant results have been derived from microarray studies, one limitation has been the lack of standards for presenting and exchanging such data. Here we present a proposal, the Minimum Information About a Microarray Experiment (MIAME), that describes the minimum information required to ensure that microarray data can be easily interpreted and that results derived from its analysis can be independently verified. The ultimate goal of this work is to establish a standard for recording and reporting microarray-based gene expression data, which will in turn facilitate the establishment of databases and public repositories and enable the development of data analysis tools. With respect to MIAME, we concentrate on defining the content and structure of the necessary information rather than the technical format for capturing it.

MeSH Terms
Computational Biology Gene Expression Profiling/methods Oligonucleotide Array Sequence Analysis/standards
Authors & Affiliations
24 authors, click to expand affiliations / ORCID
Brazma A
European Bioinformatics Institute, EMBL outstation, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. brazma@ebi.ac.uk
Hingamp P
Quackenbush J
Sherlock G
Spellman P
Stoeckert C
Aach J
Ansorge W
Ball C A
Causton H C
Gaasterland T
Glenisson P
Holstege F C
Kim I F
Markowitz V
Matese J C
Parkinson H
Robinson A
Sarkans U
Schulze-Kremer S
Stewart J
Taylor R
Vilo J
Vingron M
Article Info
Journal
Nature genetics
Abbr.
Nat Genet
ISSN
1061-4036
Published
2001-12-00
Pages
365-71
Language
English
Region
United States
NLM ID
9216904
Subset
IM
Corrections
CommentIn
CommentIn
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com