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PMID: 11672445 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Commitment of apolipoprotein B RNA to the splicing pathway regulates cytidine-to-uridine editing-site utilization.

The Biochemical journal ·Vol. 359 ·No. Pt 3 ·2001-11-01 ·Pages 697-705

Sowden MP, Smith HC

Abstract

A tripartite motif located in the centre of the 7.5 kb exon 26 of apolipoprotein B (apoB) mRNA directs editosome assembly and site-specific cytidine-to-uridine editing at nucleotide 6666. apoB mRNA editing is a post-transcriptional event, occurring primarily at the time exon 26 is spliced or at a time after splicing, but before nuclear export. We show, through reporter RNA constructs, that RNA splice sites suppress editing of precursor RNAs when placed proximal or distal to the editing site. Processed RNAs were edited more efficiently than precursor RNAs. Mutation of both the splice donor and acceptor sites was necessary for RNAs to be edited efficiently. The results suggested that commitment of pre-mRNA to the splicing and/or nuclear-export pathways may play a role in regulating editing-site utilization. The HIV-1 Rev-Rev response element ('RRE') interaction was utilized to uncouple the commitment of precursor RNAs to the spliceosome assembly pathway and associated nuclear-export pathway. Under these conditions, unspliced reporter RNAs were edited efficiently. We propose that pre-mRNA passage through the temporal or spatial restriction point where they become committed to spliceosome assembly contributes regulatory information for subsequent editosome activity.

MeSH Terms
Animals Apolipoproteins B/genetics Genes, env/genetics Humans Introns/genetics RNA Editing/genetics RNA Splicing/genetics Rats Spliceosomes/metabolism Tumor Cells, Cultured
Chemicals
Apolipoproteins B
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Sowden M P
Department of Biochemistry and Biophysics, University of Rochester School of Medicine and Dentistry, 601 Elmwood Avenue, Rochester, NY 14642, USA.
Smith H C
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Article Info
Journal
The Biochemical journal
Abbr.
Biochem J
ISSN
0264-6021
Published
2001-11-01
Pages
697-705
Language
English
Region
England
NLM ID
2984726R
PMCID
PMC1222192
Subset
IM
Grants
NIDDK NIH HHS · DK43739 · United States
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