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PMID: 11406384 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Review

Clustering and analysis of protein families.

Current opinion in structural biology ·Vol. 11 ·No. 3 ·2001-06-00 ·Pages 334-9

Kriventseva EV, Biswas M, Apweiler R

Abstract

Various sequence-motif and sequence-cluster databases have been integrated into a new resource known as InterPro. Because the contributing databases have different clustering principles and scoring sensitivities, the combined assignments complement each other for grouping protein families and delineating domains. InterPro and new developments in the analysis of both the phylogenetic profiles of protein families and domain fusion events improve the prediction of specific functions for numerous proteins.

MeSH Terms
Amino Acid Motifs Databases, Factual Phylogeny Proteins Sequence Alignment/methods
Chemicals
Proteins
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Kriventseva E V
EMBL Outstation, The European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridgeshire CB10 1SD, Hinxton, UK.
Biswas M
Apweiler R
Article Info
Journal
Current opinion in structural biology
Abbr.
Curr Opin Struct Biol
ISSN
0959-440X
Published
2001-06-00
Pages
334-9
Language
English
Region
England
NLM ID
9107784
Subset
IM
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