Home LiteratureArticle Details
PMID: 11344314 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Multiple maternal origins and weak phylogeographic structure in domestic goats.

Luikart G, Gielly L, Excoffier L, Vigne JD, Bouvet J, Taberlet P

Abstract

Domestic animals have played a key role in human history. Despite their importance, however, the origins of most domestic species remain poorly understood. We assessed the phylogenetic history and population structure of domestic goats by sequencing a hypervariable segment (481 bp) of the mtDNA control region from 406 goats representing 88 breeds distributed across the Old World. Phylogeographic analysis revealed three highly divergent goat lineages (estimated divergence >200,000 years ago), with one lineage occurring only in eastern and southern Asia. A remarkably similar pattern exists in cattle, sheep, and pigs. These results, combined with recent archaeological findings, suggest that goats and other farm animals have multiple maternal origins with a possible center of origin in Asia, as well as in the Fertile Crescent. The pattern of goat mtDNA diversity suggests that all three lineages have undergone population expansions, but that the expansion was relatively recent for two of the lineages (including the Asian lineage). Goat populations are surprisingly less genetically structured than cattle populations. In goats only approximately 10% of the mtDNA variation is partitioned among continents. In cattle the amount is >/=50%. This weak structuring suggests extensive intercontinental transportation of goats and has intriguing implications about the importance of goats in historical human migrations and commerce.

MeSH Terms
Animals Animals, Domestic Base Sequence DNA Primers DNA, Mitochondrial/genetics Female Genomic Imprinting Geography Goats/genetics Molecular Sequence Data Phylogeny Population Dynamics
Chemicals
DNA Primers DNA, Mitochondrial
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Luikart G
Laboratoire de Biologie des Populations d'Altitude, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 5553, Université Joseph Fourier, B.P. 53, F-38041 Grenoble Cedex 9, France.
Gielly L
Excoffier L
Vigne J D
Bouvet J
Taberlet P
References (16)
16 references, click to expand
  1. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.
    J Mol Evol. 1980 Dec;16(2):111-20 PMID: 7463489
  2. African populations and the evolution of human mitochondrial DNA.
    Science. 1991 Sep 27;253(5027):1503-7 PMID: 1840702
  3. Population growth makes waves in the distribution of pairwise genetic differences.
    Mol Biol Evol. 1992 May;9(3):552-69 PMID: 1316531
  4. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data.
    Genetics. 1992 Jun;131(2):479-91 PMID: 1644282
  5. Substitution rate variation among sites in hypervariable region 1 of human mitochondrial DNA.
    J Mol Evol. 1993 Dec;37(6):613-23 PMID: 8114114
  6. Evidence for two independent domestications of cattle.
    Proc Natl Acad Sci U S A. 1994 Mar 29;91(7):2757-61 PMID: 8146187
  7. Pairwise comparisons of mitochondrial DNA sequences in subdivided populations and implications for early human evolution.
    Genetics. 1994 Feb;136(2):673-83 PMID: 8150290
  8. Mitochondrial diversity and the origins of African and European cattle.
    Proc Natl Acad Sci U S A. 1996 May 14;93(10):5131-5 PMID: 8643540
  9. Approximate methods for estimating the pattern of nucleotide substitution and the variation of substitution rates among sites.
    Mol Biol Evol. 1996 May;13(5):650-9 PMID: 8676739
  10. Analysis of mitochondrial DNA indicates that domestic sheep are derived from two different ancestral maternal sources: no evidence for contributions from urial and argali sheep.
    J Hered. 1998 Mar-Apr;89(2):113-20 PMID: 9542158
  11. Estimation of past demographic parameters from the distribution of pairwise differences when the mutation rates vary among sites: application to human mitochondrial DNA.
    Genetics. 1999 Jul;152(3):1079-89 PMID: 10388826
  12. Mitochondrial DNA variation in cattle of south China: origin and introgression.
    Anim Genet. 1999 Aug;30(4):245-50 PMID: 10467698
  13. Why hunter-gatherer populations do not show signs of pleistocene demographic expansions.
    Proc Natl Acad Sci U S A. 1999 Sep 14;96(19):10597-602 PMID: 10485871
  14. Systematics of the genus Capra inferred from mitochondrial DNA sequence data.
    Mol Phylogenet Evol. 1999 Dec;13(3):504-10 PMID: 10620408
  15. The initial domestication of goats (Capra hircus) in the Zagros mountains 10,000 years ago.
    Science. 2000 Mar 24;287(5461):2254-7 PMID: 10731145
  16. The origin of the domestic pig: independent domestication and subsequent introgression.
    Genetics. 2000 Apr;154(4):1785-91 PMID: 10747069
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
2001-05-08
Pages
5927-32
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC33315
Subset
IM
Databases
GENBANK
AJ317533, AJ317534, AJ317535, AJ317536, AJ317537, AJ317538, AJ317539, AJ317540, AJ317541, AJ317542, AJ317543, AJ317544, AJ317545, AJ317546, AJ317547, AJ317548, AJ317549, AJ317550, AJ317551, AJ317552, AJ317553, AJ317554, AJ317555, AJ317556, AJ317557, AJ317558, AJ317559, AJ317560, AJ317561, AJ317562, AJ317563, AJ317564, AJ317565, AJ317566, AJ317567, AJ317568, AJ317569, AJ317570, AJ317571, AJ317572, AJ317573, AJ317574, AJ317575
Corrections
CommentIn
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com