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PMID: 11284715 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Identification and characterization of a novel sucrose-non-fermenting protein kinase/AMP-activated protein kinase-related protein kinase, SNARK.

The Biochemical journal ·Vol. 355 ·No. Pt 2 ·2001-04-15 ·Pages 297-305

Lefebvre DL, Bai Y, Shahmolky N, Sharma M, Poon R, Drucker DJ, Rosen CF

Abstract

Subtraction hybridization after the exposure of keratinocytes to ultraviolet radiation identified a differentially expressed cDNA that encodes a protein of 630 amino acid residues possessing significant similarity to the catalytic domain of the sucrose-non-fermenting protein kinase (SNF1)/AMP-activated protein kinase (AMPK) family of serine/threonine protein kinases. Northern blotting and reverse-transcriptase-mediated PCR demonstrated that mRNA transcripts for the SNF1/AMPK-related kinase (SNARK) were widely expressed in rodent tissues. The SNARK gene was localized to human chromosome 1q32 by fluorescent in situ hybridization. SNARK was translated in vitro to yield a single protein band of approx. 76 kDa; Western analysis of transfected baby hamster kidney (BHK) cells detected two SNARK-immunoreactive bands of approx. 76-80 kDa. SNARK was capable of autophosphorylation in vitro; immunoprecipitated SNARK exhibited phosphotransferase activity with the synthetic peptide substrate HMRSAMSGLHLVKRR (SAMS) as a kinase substrate. SNARK activity was significantly increased by AMP and 5-amino-4-imidazolecarboxamide riboside (AICAriboside) in rat keratinocyte cells, implying that SNARK might be activated by an AMPK kinase-dependent pathway. Furthermore, glucose deprivation increased SNARK activity 3-fold in BHK fibroblasts. These findings identify SNARK as a glucose- and AICAriboside-regulated member of the AMPK-related gene family that represents a new candidate mediator of the cellular response to metabolic stress.

MeSH Terms
Adenosine Monophosphate/pharmacology Amino Acid Sequence Aminoimidazole Carboxamide/analogs & derivatives,pharmacology Animals Base Sequence Cells, Cultured Chromosome Mapping Cricetinae DNA, Complementary Enzyme Activation Glucose/metabolism Humans Hydrogen-Ion Concentration Molecular Sequence Data Phosphorylation Precipitin Tests Protein Serine-Threonine Kinases/chemistry,genetics,metabolism RNA, Messenger/genetics Rats Ribonucleotides/pharmacology Sequence Homology, Amino Acid Substrate Specificity
Chemicals
DNA, Complementary RNA, Messenger Ribonucleotides Aminoimidazole Carboxamide Adenosine Monophosphate Nuak2 protein, rat NUAK2 protein, human Protein Serine-Threonine Kinases AICA ribonucleotide Glucose
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Lefebvre D L
Department of Medicine, Division of Dermatology, Toronto General Hospital, Banting Institute, Room 317, 100 College Street, Toronto M5G 1L5, Ontario, Canada.
Bai Y
Shahmolky N
Sharma M
Poon R
Drucker D J
Rosen C F
References (43)
43 references, click to expand
  1. Emk, a protein kinase with homologs in yeast maps to mouse chromosome 19.
    Mamm Genome. 1993;4(7):401-3 PMID: 8358177
  2. Identification of glucagon-like peptide-2 (GLP-2)-activated signaling pathways in baby hamster kidney fibroblasts expressing the rat GLP-2 receptor.
    J Biol Chem. 1999 Oct 22;274(43):30459-67 PMID: 10521425
  3. Characterization of tobacco protein kinase NPK5, a homolog of Saccharomyces cerevisiae SNF1 that constitutively activates expression of the glucose-repressible SUC2 gene for a secreted invertase of S. cerevisiae.
    Mol Cell Biol. 1994 May;14(5):2958-65 PMID: 8164654
  4. Yeast SNF1 is functionally related to mammalian AMP-activated protein kinase and regulates acetyl-CoA carboxylase in vivo.
    J Biol Chem. 1994 Jul 29;269(30):19509-15 PMID: 7913470
  5. Identification of novel protein kinases expressed in the myocardium of the developing mouse heart.
    Mech Dev. 1994 Dec;48(3):153-64 PMID: 7893599
  6. Similar substrate recognition motifs for mammalian AMP-activated protein kinase, higher plant HMG-CoA reductase kinase-A, yeast SNF1, and mammalian calmodulin-dependent protein kinase I.
    FEBS Lett. 1995 Mar 20;361(2-3):191-5 PMID: 7698321
  7. Catalytic subunits of the porcine and rat 5'-AMP-activated protein kinase are members of the SNF1 protein kinase family.
    Biochim Biophys Acta. 1995 Apr 6;1266(1):73-82 PMID: 7718624
  8. UVB radiation-activated genes induced by transcriptional and posttranscriptional mechanisms in rat keratinocytes.
    Am J Physiol. 1995 Apr;268(4 Pt 1):C846-55 PMID: 7733233
  9. 5-aminoimidazole-4-carboxamide ribonucleoside. A specific method for activating AMP-activated protein kinase in intact cells?
    Eur J Biochem. 1995 Apr 15;229(2):558-65 PMID: 7744080
  10. Differential expression of two barley SNF1-related protein kinase genes.
    Plant Mol Biol. 1995 Mar;27(6):1235-40 PMID: 7766906
  11. Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification.
    FASEB J. 1995 May;9(8):576-96 PMID: 7768349
  12. Molecular cloning and characterization of a novel mammalian protein kinase harboring a homology domain that defines a subfamily of serine/threonine kinases.
    Eur J Biochem. 1996 Feb 1;235(3):736-43 PMID: 8654423
  13. Cloning and characterization of Hunk, a novel mammalian SNF1-related protein kinase.
    Genomics. 2000 Jan 1;63(1):46-59 PMID: 10662544
  14. Role of AMP-activated protein kinase in the regulation by glucose of islet beta cell gene expression.
    Proc Natl Acad Sci U S A. 2000 Apr 11;97(8):4023-8 PMID: 10760274
  15. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.
    Anal Biochem. 1983 Jul 1;132(1):6-13 PMID: 6312838
  16. A yeast gene that is essential for release from glucose repression encodes a protein kinase.
    Science. 1986 Sep 12;233(4769):1175-80 PMID: 3526554
  17. Fast and sensitive multiple sequence alignments on a microcomputer.
    Comput Appl Biosci. 1989 Apr;5(2):151-3 PMID: 2720464
  18. Tissue distribution of the AMP-activated protein kinase, and lack of activation by cyclic-AMP-dependent protein kinase, studied using a specific and sensitive peptide assay.
    Eur J Biochem. 1989 Dec 8;186(1-2):123-8 PMID: 2574667
  19. High-resolution mapping of human chromosome 11 by in situ hybridization with cosmid clones.
    Science. 1990 Jan 5;247(4938):64-9 PMID: 2294592
  20. Calcium phosphate-mediated gene transfer: a highly efficient transfection system for stably transforming cells with plasmid DNA.
    Biotechniques. 1988 Jul-Aug;6(7):632-8 PMID: 3273409
  21. Ultraviolet radiation induction of ornithine decarboxylase in rat keratinocytes.
    Cancer Res. 1990 May 1;50(9):2631-5 PMID: 2328489
  22. Complementation of snf1, a mutation affecting global regulation of carbon metabolism in yeast, by a plant protein kinase cDNA.
    Proc Natl Acad Sci U S A. 1991 Oct 1;88(19):8602-5 PMID: 1924320
  23. Inhibition by AICA riboside of gluconeogenesis in isolated rat hepatocytes.
    Diabetes. 1991 Oct;40(10):1259-66 PMID: 1657665
  24. Structure and expression of a gene from Arabidopsis thaliana encoding a protein related to SNF1 protein kinase.
    Gene. 1992 Oct 21;120(2):249-54 PMID: 1339373
  25. Molecular analyses of a barley multigene family homologous to the yeast protein kinase gene SNF1.
    Plant J. 1992 Sep;2(5):791-7 PMID: 1302632
  26. Activation of glycogen phosphorylase and glycogenolysis in rat skeletal muscle by AICAR--an activator of AMP-activated protein kinase.
    FEBS Lett. 1996 Mar 11;382(1-2):43-7 PMID: 8612761
  27. Stimulation of rat liver AMP-activated protein kinase by AMP analogues.
    Biochim Biophys Acta. 1996 Jun 4;1290(2):197-203 PMID: 8645724
  28. Inactivation of acetyl-CoA carboxylase and activation of AMP-activated protein kinase in muscle during exercise.
    Am J Physiol. 1996 Feb;270(2 Pt 1):E299-304 PMID: 8779952
  29. PfKIN, an SNF1 type protein kinase of Plasmodium falciparum predominantly expressed in gametocytes.
    Mol Biochem Parasitol. 1996 Feb-Mar;76(1-2):299-303 PMID: 8920016
  30. Glucose repression/derepression in budding yeast: SNF1 protein kinase is activated by phosphorylation under derepressing conditions, and this correlates with a high AMP:ATP ratio.
    Curr Biol. 1996 Nov 1;6(11):1426-34 PMID: 8939604
  31. New member of the Snf1/AMPK kinase family, Melk, is expressed in the mouse egg and preimplantation embryo.
    Mol Reprod Dev. 1997 Jun;47(2):148-56 PMID: 9136115
  32. Signal transduction by the c-Jun N-terminal kinase (JNK)--from inflammation to development.
    Curr Opin Cell Biol. 1998 Apr;10(2):205-19 PMID: 9561845
  33. AMP-activated protein kinase: greater AMP dependence, and preferential nuclear localization, of complexes containing the alpha2 isoform.
    Biochem J. 1998 Aug 15;334 ( Pt 1):177-87 PMID: 9693118
  34. The AMP-activated/SNF1 protein kinase subfamily: metabolic sensors of the eukaryotic cell?
    Annu Rev Biochem. 1998;67:821-55 PMID: 9759505
  35. AMP-activated protein kinase is activated by low glucose in cell lines derived from pancreatic beta cells, and may regulate insulin release.
    Biochem J. 1998 Nov 1;335 ( Pt 3):533-9 PMID: 9794792
  36. Rice has two distinct classes of protein kinase genes related to SNF1 of Saccharomyces cerevisiae, which are differently regulated in early seed development.
    Mol Gen Genet. 1998 Nov;260(4):388-94 PMID: 9870704
  37. Two SNF1-related protein kinases from spinach leaf phosphorylate and inactivate 3-hydroxy-3-methylglutaryl-coenzyme A reductase, nitrate reductase, and sucrose phosphate synthase in vitro.
    Plant Physiol. 1999 May;120(1):257-74 PMID: 10318703
  38. Glucose repression in yeast.
    Curr Opin Microbiol. 1999 Apr;2(2):202-7 PMID: 10322167
  39. Sac3, an Snf1-like serine/threonine kinase that positively and negatively regulates the responses of Chlamydomonas to sulfur limitation.
    Plant Cell. 1999 Jun;11(6):1179-90 PMID: 10368187
  40. Cloning of a novel kinase (SIK) of the SNF1/AMPK family from high salt diet-treated rat adrenal.
    FEBS Lett. 1999 Jun 18;453(1-2):135-9 PMID: 10403390
  41. Arabidopsis thaliana proteins related to the yeast SIP and SNF4 interact with AKINalpha1, an SNF1-like protein kinase.
    Plant J. 1999 Jun;18(5):541-50 PMID: 10417704
  42. UVB and gamma-radiation induce the expression of mRNAs encoding the ribosomal subunit L13A in rat keratinocytes.
    Photochem Photobiol. 1999 Sep;70(3):341-7 PMID: 10483362
  43. Mammalian AMP-activated protein kinase is homologous to yeast and plant protein kinases involved in the regulation of carbon metabolism.
    J Biol Chem. 1994 Apr 15;269(15):11442-8 PMID: 7908907
Article Info
Journal
The Biochemical journal
Abbr.
Biochem J
ISSN
0264-6021
Published
2001-04-15
Pages
297-305
Language
English
Region
England
NLM ID
2984726R
PMCID
PMC1221739
Subset
IM
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