Abstract
We report the isolation and characterization of a member of the family Enterobacteriaceae isolated from the gallbladder pus of a food handler. Conventional biochemical tests suggested Salmonella enterica serotype Typhi, but the isolate agglutinated with poly(O), 2O, 9O, and Vi Salmonella antisera but not with poly(H) or any individual H Salmonella antisera. 16S rRNA gene sequencing showed that there were two base differences between the isolate and Salmonella enterica serotype Montevideo, four base differences between the isolate and serotype Typhi, five base differences between the isolate and Salmonella enterica serotype Typhimurium, and six base differences between the isolate and Salmonella enterica serotype Dublin, indicating that the isolate was a strain of S. enterica. Electron microscopy confirmed that the isolate was aflagellated. The flagellin gene sequence of the isolate was 100% identical to that of the H1-d flagellin gene of serotype Typhi. Sequencing of the rfbE gene, which encoded the CDP-tyvelose epimerase of the isolate, showed that there was a point mutation at position +694 (G-->T), leading to an amino acid substitution (Gly-->Cys). This may have resulted in a protein of reduced catalytic activity and hence the presence of both 2O and 9O antigens. We therefore concluded that the isolate was a variant of serotype Typhi. Besides antibiotic therapy and cholecystectomy, removal of all stones in the biliary tree was performed for eradication of the carrier state.
MeSH Terms
Amino Acid Sequence
Bacterial Typing Techniques
Base Sequence
Carbohydrate Epimerases/genetics
Cholangitis/microbiology
Cholecystitis/microbiology
DNA, Bacterial/analysis
Flagellin/genetics
Genes, rRNA/genetics
Humans
Male
Microscopy, Electron
Middle Aged
Molecular Sequence Data
Polymerase Chain Reaction
RNA, Ribosomal, 16S/genetics
Salmonella typhi/classification,genetics,isolation & purification
Transaminases/genetics
Typhoid Fever/microbiology
Chemicals
DNA, Bacterial
RNA, Ribosomal, 16S
Flagellin
Transaminases
Carbohydrate Epimerases
perosamine synthetase
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Woo P C
Department of Microbiology, The University of Hong Kong, University Pathology Building, Queen Mary Hospital, Hong Kong, Republic of China.
Fung A M
Wong S S
Tsoi H W
Yuen K Y
References (13)
13 references, click to expand
-
Salmonella nomenclature.
J Clin Microbiol. 2000 Jul;38(7):2465-7
PMID: 10878026
-
Identification of Mycobacterium neoaurum isolated from a neutropenic patient with catheter-related bacteremia by 16S rRNA sequencing.
J Clin Microbiol. 2000 Sep;38(9):3515-7
PMID: 10970421
-
Identification by 16S ribosomal RNA gene sequencing of an Enterobacteriaceae species from a bone marrow transplant recipient.
Mol Pathol. 2000 Aug;53(4):211-5
PMID: 11040945
-
Intestinal inflammatory pseudotumour with regional lymph node involvement: identification of a new bacterium as the aetiological agent.
J Pathol. 2000 Nov;192(3):289-92
PMID: 11054710
-
Identification and sequence of rfbS and rfbE, which determine antigenic specificity of group A and group D salmonellae.
J Bacteriol. 1989 Oct;171(10):5694-701
PMID: 2793833
-
Intragenic recombination in a flagellin gene: characterization of the H1-j gene of Salmonella typhi.
EMBO J. 1989 Oct;8(10):3149-52
PMID: 2583095
-
Restriction fragment length polymorphism analysis of some flagellin genes of Salmonella enterica.
J Clin Microbiol. 1998 Oct;36(10):2835-43
PMID: 9738029
-
There must be a prokaryote somewhere: microbiology's search for itself.
Microbiol Rev. 1994 Mar;58(1):1-9
PMID: 8177167
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
Nucleic Acids Res. 1994 Nov 11;22(22):4673-80
PMID: 7984417
-
Distinct genotypic distributions of cytomegalovirus (CMV) envelope glycoprotein in bone marrow and renal transplant recipients with CMV disease.
Clin Diagn Lab Immunol. 1997 Sep;4(5):515-8
PMID: 9302197
-
Inpatient emergencies encountered by an infectious disease consultative service.
Clin Infect Dis. 1998 Mar;26(3):695-701
PMID: 9524847
-
Phylogenetic relationships of Salmonella based on rRNA sequences.
Int J Syst Bacteriol. 1998 Apr;48 Pt 2:605-10
PMID: 9731304
-
Ribosomal RNA: a key to phylogeny.
FASEB J. 1993 Jan;7(1):113-23
PMID: 8422957