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PMID: 11154260 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

The 3' untranslated region of tumor necrosis factor alpha mRNA is a target of the mRNA-stabilizing factor HuR.

Molecular and cellular biology ·Vol. 21 ·No. 3 ·2001-02-00 ·Pages 721-30

Dean JL, Wait R, Mahtani KR, Sully G, Clark AR, Saklatvala J

Abstract

Posttranscriptional regulation is important for tumor necrosis factor alpha (TNF-alpha) expression in monocytes and macrophages, and an AU-rich element (ARE) in the 3' untranslated region (UTR) of TNF-alpha mRNA is implicated in control of its translation and mRNA stability. Regulation of mRNA turnover is thought to be mediated by trans-acting proteins, which bind the ARE and stabilize or destabilize the transcript. However, with the exception of the destabilizing factor tristetraprolin, the identity and function of the proteins binding the TNF-alpha mRNA ARE have not been established. To identify other proteins involved in the posttranscriptional control of TNF-alpha, the subcellular location of TNF-alpha mRNA was determined in the macrophage-like cell line RAW 264.7. TNF-alpha mRNA was located in the pellet following centrifugation of cytoplasm at 100,000 x g (P100 fraction). This fraction also contained proteins which formed two distinct ARE-specific complexes with the TNF-alpha mRNA 3' UTR in electrophoretic mobility shift assays (EMSAs). A protein present in these two complexes was purified and identified by peptide mass mapping and tandem mass spectrometry as HuR. In EMSAs both complexes were supershifted by an anti-HuR antibody, while Western blotting also demonstrated the presence of HuR in the P100 extract. A HeLa cell tetracycline-regulated reporter system was used to determine the effect of HuR on mRNA stability. In this system, overexpression of HuR resulted in stabilization of an otherwise unstable reporter-mRNA containing the TNF-alpha ARE. These results demonstrate that the TNF-alpha ARE is a target of the mRNA-stabilizing factor HuR.

MeSH Terms
3' Untranslated Regions Amino Acid Sequence Animals Antigens, Surface Base Sequence Cell Line DNA/genetics,metabolism DNA Primers/genetics ELAV Proteins ELAV-Like Protein 1 Gene Expression Genes, Reporter Globins/genetics HeLa Cells Humans Mice Molecular Sequence Data RNA Processing, Post-Transcriptional RNA Stability RNA, Messenger/genetics,metabolism RNA-Binding Proteins/genetics,isolation & purification,metabolism Tumor Necrosis Factor-alpha/genetics
Chemicals
3' Untranslated Regions Antigens, Surface DNA Primers ELAV Proteins ELAV-Like Protein 1 ELAVL1 protein, human RNA, Messenger RNA-Binding Proteins Tumor Necrosis Factor-alpha Globins DNA
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Dean J L
Kennedy Institute of Rheumatology Division, Imperial College School of Medicine, Hammersmith, London W6 8LH, United Kingdom. jonathan.dean@ic.ac.uk
Wait R
Mahtani K R
Sully G
Clark A R
Saklatvala J
References (61)
61 references, click to expand
  1. p38 mitogen-activated protein kinase regulates cyclooxygenase-2 mRNA stability and transcription in lipopolysaccharide-treated human monocytes.
    J Biol Chem. 1999 Jan 1;274(1):264-9 PMID: 9867839
  2. TIA-1 is a translational silencer that selectively regulates the expression of TNF-alpha.
    EMBO J. 2000 Aug 1;19(15):4154-63 PMID: 10921895
  3. Identification of TIAR as a protein binding to the translational regulatory AU-rich element of tumor necrosis factor alpha mRNA.
    J Biol Chem. 1999 Jan 22;274(4):2322-6 PMID: 9890998
  4. Mass spectrometric identification of proteins from silver-stained polyacrylamide gel: a method for the removal of silver ions to enhance sensitivity.
    Electrophoresis. 1999 Mar;20(3):601-5 PMID: 10217175
  5. RNA-binding proteins TIA-1 and TIAR link the phosphorylation of eIF-2 alpha to the assembly of mammalian stress granules.
    J Cell Biol. 1999 Dec 27;147(7):1431-42 PMID: 10613902
  6. Role of cytokines in rheumatoid arthritis.
    Annu Rev Immunol. 1996;14:397-440 PMID: 8717520
  7. The biology of cachectin/TNF--a primary mediator of the host response.
    Annu Rev Immunol. 1989;7:625-55 PMID: 2540776
  8. Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry.
    Nature. 1996 Feb 1;379(6564):466-9 PMID: 8559255
  9. Identification of a common nucleotide sequence in the 3'-untranslated region of mRNA molecules specifying inflammatory mediators.
    Proc Natl Acad Sci U S A. 1986 Mar;83(6):1670-4 PMID: 2419912
  10. Impaired on/off regulation of TNF biosynthesis in mice lacking TNF AU-rich elements: implications for joint and gut-associated immunopathologies.
    Immunity. 1999 Mar;10(3):387-98 PMID: 10204494
  11. Glyceraldehyde-3-phosphate dehydrogenase selectively binds AU-rich RNA in the NAD(+)-binding region (Rossmann fold).
    J Biol Chem. 1995 Feb 10;270(6):2755-63 PMID: 7531693
  12. Regulation of tumour necrosis factor alpha mRNA stability by the mitogen-activated protein kinase p38 signalling cascade.
    FEBS Lett. 2000 Oct 13;483(1):57-61 PMID: 11033356
  13. Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels.
    Anal Chem. 1996 Mar 1;68(5):850-8 PMID: 8779443
  14. AUH, a gene encoding an AU-specific RNA binding protein with intrinsic enoyl-CoA hydratase activity.
    Proc Natl Acad Sci U S A. 1995 Mar 14;92(6):2051-5 PMID: 7892223
  15. A conserved AU sequence from the 3' untranslated region of GM-CSF mRNA mediates selective mRNA degradation.
    Cell. 1986 Aug 29;46(5):659-67 PMID: 3488815
  16. Internal sequences from proteins digested in polyacrylamide gels.
    Anal Biochem. 1995 Jan 1;224(1):75-82 PMID: 7710119
  17. Cytokine mRNA decay is accelerated by an inhibitor of p38-mitogen-activated protein kinase.
    Inflamm Res. 1999 Oct;48(10):533-8 PMID: 10563470
  18. ELAV proteins stabilize deadenylated intermediates in a novel in vitro mRNA deadenylation/degradation system.
    Genes Dev. 1999 Jan 15;13(2):188-201 PMID: 9925643
  19. Mammalian Hsp70 and Hsp110 proteins bind to RNA motifs involved in mRNA stability.
    J Biol Chem. 1999 Jun 11;274(24):17318-24 PMID: 10358092
  20. RNA stabilization by the AU-rich element binding protein, HuR, an ELAV protein.
    EMBO J. 1998 Jun 15;17(12):3461-70 PMID: 9628881
  21. Unraveling a cytoplasmic role for hnRNP D in the in vivo mRNA destabilization directed by the AU-rich element.
    Genes Dev. 1999 Jul 15;13(14):1884-97 PMID: 10421639
  22. Mammalian homologs of Drosophila ELAV localized to a neuronal subset can bind in vitro to the 3' UTR of mRNA encoding the Id transcriptional repressor.
    J Neurosci. 1994 Apr;14(4):1943-52 PMID: 8158249
  23. Overexpression of HuR, a nuclear-cytoplasmic shuttling protein, increases the in vivo stability of ARE-containing mRNAs.
    EMBO J. 1998 Jun 15;17(12):3448-60 PMID: 9628880
  24. Embryonic lethal abnormal visual RNA-binding proteins involved in growth, differentiation, and posttranscriptional gene expression.
    Am J Hum Genet. 1997 Aug;61(2):273-8 PMID: 9311730
  25. A p38 MAP kinase inhibitor regulates stability of interleukin-1-induced cyclooxygenase-2 mRNA.
    FEBS Lett. 1998 Nov 13;439(1-2):75-80 PMID: 9849881
  26. Isolation and characterization of a novel, low abundance hnRNP protein: A0.
    RNA. 1995 Apr;1(2):171-82 PMID: 7585247
  27. HuR regulates p21 mRNA stabilization by UV light.
    Mol Cell Biol. 2000 Feb;20(3):760-9 PMID: 10629032
  28. Protein kinase regulates tumor necrosis factor mRNA stability in virus-stimulated astrocytes.
    J Exp Med. 1990 Sep 1;172(3):989-92 PMID: 2388040
  29. Binding of neuronal ELAV-like proteins to the uridine-rich sequence in the 3'-untranslated region of tumor necrosis factor-alpha messenger RNA.
    FEBS Lett. 1999 Mar 5;446(1):157-62 PMID: 10100634
  30. Engagement of tumor necrosis factor mRNA by an endotoxin-inducible cytoplasmic protein.
    Mol Med. 1996 Jul;2(4):479-88 PMID: 8827718
  31. A conserved family of elav-like genes in vertebrates.
    Proc Natl Acad Sci U S A. 1995 May 9;92(10):4557-61 PMID: 7753842
  32. Cloning and characterization of HuR, a ubiquitously expressed Elav-like protein.
    J Biol Chem. 1996 Apr 5;271(14):8144-51 PMID: 8626503
  33. hnRNP A2 and hnRNP L bind the 3'UTR of glucose transporter 1 mRNA and exist as a complex in vivo.
    Biochem Biophys Res Commun. 1999 Aug 11;261(3):646-51 PMID: 10441480
  34. Control of tumor necrosis factor gene expression.
    Crit Rev Eukaryot Gene Expr. 1994;4(2-3):323-44 PMID: 7881165
  35. Selective degradation of early-response-gene mRNAs: functional analyses of sequence features of the AU-rich elements.
    Mol Cell Biol. 1994 Dec;14(12):8471-82 PMID: 7969180
  36. A broader role for AU-rich element-mediated mRNA turnover revealed by a new transcriptional pulse strategy.
    Nucleic Acids Res. 1998 Jan 15;26(2):558-65 PMID: 9421516
  37. Hypoxic stabilization of vascular endothelial growth factor mRNA by the RNA-binding protein HuR.
    J Biol Chem. 1998 Mar 13;273(11):6417-23 PMID: 9497373
  38. HNS, a nuclear-cytoplasmic shuttling sequence in HuR.
    Proc Natl Acad Sci U S A. 1998 Dec 22;95(26):15293-8 PMID: 9860962
  39. Feedback inhibition of macrophage tumor necrosis factor-alpha production by tristetraprolin.
    Science. 1998 Aug 14;281(5379):1001-5 PMID: 9703499
  40. HuD, a paraneoplastic encephalomyelitis antigen, contains RNA-binding domains and is homologous to Elav and Sex-lethal.
    Cell. 1991 Oct 18;67(2):325-33 PMID: 1655278
  41. Purification, characterization, and cDNA cloning of an AU-rich element RNA-binding protein, AUF1.
    Mol Cell Biol. 1993 Dec;13(12):7652-65 PMID: 8246982
  42. Two distinct regions in the 3' untranslated region of tumor necrosis factor alpha mRNA form complexes with macrophage proteins.
    Mol Cell Biol. 1996 Oct;16(10):5579-90 PMID: 8816470
  43. Poly(A) removal is the kinase-regulated step in tumor necrosis factor mRNA decay.
    J Biol Chem. 1992 Feb 5;267(4):2123-6 PMID: 1310308
  44. Developmental regulation of RNA transcript destabilization by A + U-rich elements is AUF1-dependent.
    J Biol Chem. 1999 Nov 26;274(48):33973-8 PMID: 10567360
  45. Evidence that tristetraprolin binds to AU-rich elements and promotes the deadenylation and destabilization of tumor necrosis factor alpha mRNA.
    Mol Cell Biol. 1999 Jun;19(6):4311-23 PMID: 10330172
  46. Identification of HuR as a protein implicated in AUUUA-mediated mRNA decay.
    EMBO J. 1997 Apr 15;16(8):2130-9 PMID: 9155038
  47. Ectopic expression of Hel-N1, an RNA-binding protein, increases glucose transporter (GLUT1) expression in 3T3-L1 adipocytes.
    Mol Cell Biol. 1997 Feb;17(2):954-62 PMID: 9001249
  48. Endotoxin-responsive sequences control cachectin/tumor necrosis factor biosynthesis at the translational level.
    J Exp Med. 1990 Feb 1;171(2):465-75 PMID: 2303781
  49. Messenger ribonucleoprotein complexes containing human ELAV proteins: interactions with cytoskeleton and translational apparatus.
    J Cell Sci. 1998 Jan;111 ( Pt 2):183-97 PMID: 9405302
  50. AU-rich elements: characterization and importance in mRNA degradation.
    Trends Biochem Sci. 1995 Nov;20(11):465-70 PMID: 8578590
  51. HuR binding to cytoplasmic mRNA is perturbed by heat shock.
    Proc Natl Acad Sci U S A. 2000 Mar 28;97(7):3073-8 PMID: 10737787
  52. Probability-based protein identification by searching sequence databases using mass spectrometry data.
    Electrophoresis. 1999 Dec;20(18):3551-67 PMID: 10612281
  53. Hel-N1: an autoimmune RNA-binding protein with specificity for 3' uridylate-rich untranslated regions of growth factor mRNAs.
    Mol Cell Biol. 1993 Jun;13(6):3494-504 PMID: 8497264
  54. HuR regulates cyclin A and cyclin B1 mRNA stability during cell proliferation.
    EMBO J. 2000 May 15;19(10):2340-50 PMID: 10811625
  55. Improved mass accuracy in matrix-assisted laser desorption/ionization time-of-flight mass spectrometry of peptides.
    J Am Soc Mass Spectrom. 1994 Nov;5(11):955-8 PMID: 24226384
  56. Regulation of interleukin-1beta-induced interleukin-6 gene expression in human fibroblast-like synoviocytes by p38 mitogen-activated protein kinase.
    J Biol Chem. 1998 Sep 18;273(38):24832-8 PMID: 9733787
  57. Association of heterogeneous nuclear ribonucleoprotein A1 and C proteins with reiterated AUUUA sequences.
    J Biol Chem. 1993 Apr 25;268(12):8881-7 PMID: 8473331
  58. ELAV protein HuA (HuR) can redistribute between nucleus and cytoplasm and is upregulated during serum stimulation and T cell activation.
    J Cell Sci. 1998 Nov;111 ( Pt 21):3145-56 PMID: 9763509
  59. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
    Nucleic Acids Res. 1997 Sep 1;25(17):3389-402 PMID: 9254694
  60. The p38 MAP kinase pathway signals for cytokine-induced mRNA stabilization via MAP kinase-activated protein kinase 2 and an AU-rich region-targeted mechanism.
    EMBO J. 1999 Sep 15;18(18):4969-80 PMID: 10487749
  61. Regulation of cyclooxygenase 2 mRNA stability by the mitogen-activated protein kinase p38 signaling cascade.
    Mol Cell Biol. 2000 Jun;20(12):4265-74 PMID: 10825190
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
2001-02-00
Pages
721-30
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC86664
Subset
IM
Corrections
ErratumIn
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