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PMID: 11152477 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Strength of the Calpha H..O hydrogen bond of amino acid residues.

The Journal of biological chemistry ·Vol. 276 ·No. 13 ·2001-03-30 ·Pages 9832-7

Scheiner S, Kar T, Gu Y

Abstract

Although the peptide C(alpha)H group has historically not been thought to form hydrogen bonds within proteins, ab initio quantum calculations show it to be a potent proton donor. Its binding energy to a water molecule lies in the range between 1.9 and 2.5 kcal/mol for nonpolar and polar amino acids; the hydrogen bond (H-bond) involving the charged lysine residue is even stronger than a conventional OH..O interaction. The preferred H-bond lengths are quite uniform, about 3.32 A. Formation of each interaction results in a downfield shift of the bridging hydrogen's chemical shift and a blue shift in the C(alpha)H stretching frequency, potential diagnostics of the presence of such an H-bond within a protein.

MeSH Terms
Amino Acids/chemistry,metabolism Carbon/chemistry,metabolism Computer Simulation Hydrogen/chemistry,metabolism Hydrogen Bonding Magnetic Resonance Spectroscopy Models, Chemical Oxygen/chemistry,metabolism Protein Binding Thermodynamics
Chemicals
Amino Acids Carbon Hydrogen Oxygen
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Scheiner S
Department of Chemistry and Biochemistry, Utah State University, Logan 84322-0300, USA. scheiner@cc.usu.edu
Kar T
Gu Y
Article Info
Journal
The Journal of biological chemistry
Abbr.
J Biol Chem
ISSN
0021-9258
Published
2001-03-30
Epub
2001-00-04
Pages
9832-7
Language
English
Region
United States
NLM ID
2985121R
Subset
IM
Grants
NIGMS NIH HHS · GM57936 · United States
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