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PMID: 11125090 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S.

The RESID Database of protein structure modifications and the NRL-3D Sequence-Structure Database.

Nucleic acids research ·Vol. 29 ·No. 1 ·2001-01-01 ·Pages 199-201

Garavelli JS, Hou Z, Pattabiraman N, Stephens RM

Abstract

The RESID Database is a comprehensive collection of annotations and structures for protein post-translational modifications including N-terminal, C-terminal and peptide chain cross-link modifications. The RESID Database includes systematic and frequently observed alternate names, Chemical Abstracts Service registry numbers, atomic formulas and weights, enzyme activities, taxonomic range, keywords, literature citations with database cross-references, structural diagrams and molecular models. The NRL-3D Sequence-Structure Database is derived from the three-dimensional structure of proteins deposited with the Research Collaboratory for Structural Bioinformatics Protein Data Bank. The NRL-3D Database includes standardized and frequently observed alternate names, sources, keywords, literature citations, experimental conditions and searchable sequences from model coordinates. These databases are freely accessible through the National Cancer Institute-Frederick Advanced Biomedical Computing Center at these web sites: http://www. ncifcrf.gov/RESID, http://www.ncifcrf.gov/NRL-3D; or at these National Biomedical Research Foundation Protein Information Resource web sites: http://pir.georgetown.edu/pirwww/dbinfo/resid .html, http://pir.georgetown.edu/pirwww/dbinfo/nrl3d .html

MeSH Terms
Amino Acids/genetics Binding Sites Databases, Factual Genetic Code Information Storage and Retrieval Internet Protein Conformation Protein Processing, Post-Translational Proteins/chemistry,genetics
Chemicals
Amino Acids Proteins
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Garavelli J S
National Biomedical Research Foundation, Protein Information Resource, Washington, DC 20007, USA. jsgaravelli@earthlink.net
Hou Z
Pattabiraman N
Stephens R M
References (7)
7 references, click to expand
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Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
1362-4962
Published
2001-01-01
Pages
199-201
Language
English
Region
England
NLM ID
0411011
PMCID
PMC29832
Subset
IM
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