Abstract
HslVU is an ATP-dependent prokaryotic protease complex. Despite detailed crystal and molecular structure determinations of free HslV and HslU, the mechanism of ATP-dependent peptide and protein hydrolysis remained unclear, mainly because the productive complex of HslV and HslU could not be unambiguously identified from the crystal data. In the crystalline complex, the I domains of HslU interact with HslV. Observations based on electron microscopy data were interpreted in the light of the crystal structure to indicate an alternative mode of association with the intermediate domains away from HslV. By generation and analysis of two dozen HslU mutants, we find that the amidolytic and caseinolytic activities of HslVU are quite robust to mutations on both alternative docking surfaces on HslU. In contrast, HslVU activity against the maltose-binding protein-SulA fusion protein depends on the presence of the I domain and is also sensitive to mutations in the N-terminal and C-terminal domains of HslU. Mutational studies around the hexameric pore of HslU seem to show that it is involved in the recognition/translocation of maltose-binding protein-SulA but not of chromogenic small substrates and casein. ATP-binding site mutations, among other things, confirm the essential role of the "sensor arginine" (R393) and the "arginine finger" (R325) in the ATPase action of HslU and demonstrate an important role for E321. Additionally, we report a better refined structure of the HslVU complex crystallized along with resorufin-labeled casein.
MeSH Terms
ATP-Dependent Proteases
Adenosine Triphosphatases/chemistry,genetics,metabolism
Adenosine Triphosphate/metabolism
Binding Sites
Crystallization
Endopeptidases/chemistry,genetics,metabolism
Heat-Shock Proteins/chemistry,genetics,metabolism
Microscopy, Electron
Models, Molecular
Molecular Chaperones/chemistry,genetics,metabolism
Mutagenesis
Serine Endopeptidases/chemistry,genetics,metabolism
Chemicals
Heat-Shock Proteins
Molecular Chaperones
Adenosine Triphosphate
Endopeptidases
ATP-Dependent Proteases
Serine Endopeptidases
Adenosine Triphosphatases
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Song H K
Abteilung Strukturforschung, Max-Planck-Institut für Biochemie, Am Klopferspitz 18a, D-82152 Planegg-Martinsried, Germany.
Hartmann C
Ramachandran R
Bochtler M
Behrendt R
Moroder L
Huber R
References (27)
27 references, click to expand
-
ATP-dependent degradation of SulA, a cell division inhibitor, by the HslVU protease in Escherichia coli.
FEBS Lett. 1999 Jul 30;456(1):211-4
PMID: 10452560
-
A subcomplex of the proteasome regulatory particle required for ubiquitin-conjugate degradation and related to the COP9-signalosome and eIF3.
Cell. 1998 Sep 4;94(5):615-23
PMID: 9741626
-
Fluorescein isothiocyanate-labeled casein assay for proteolytic enzymes.
Anal Biochem. 1984 Nov 15;143(1):30-4
PMID: 6442109
-
Functional dissection of a cell-division inhibitor, SulA, of Escherichia coli and its negative regulation by Lon.
Mol Gen Genet. 1997 Apr 28;254(4):351-7
PMID: 9180687
-
Purification and characterization of the heat shock proteins HslV and HslU that form a new ATP-dependent protease in Escherichia coli.
J Biol Chem. 1996 Jun 14;271(24):14035-40
PMID: 8662828
-
Crystal structure of heat shock locus V (HslV) from Escherichia coli.
Proc Natl Acad Sci U S A. 1997 Jun 10;94(12):6070-4
PMID: 9177170
-
Sequence analysis of four new heat-shock genes constituting the hslTS/ibpAB and hslVU operons in Escherichia coli.
Gene. 1993 Nov 30;134(1):1-6
PMID: 8244018
-
HSP100/Clp proteins: a common mechanism explains diverse functions.
Trends Biochem Sci. 1996 Aug;21(8):289-96
PMID: 8772382
-
Regulatory subunits of energy-dependent proteases.
Cell. 1997 Nov 14;91(4):435-8
PMID: 9390551
-
The ATP-dependent HslVU protease from Escherichia coli is a four-ring structure resembling the proteasome.
Nat Struct Biol. 1997 Feb;4(2):133-9
PMID: 9033594
-
An improved assay for nanomole amounts of inorganic phosphate.
Anal Biochem. 1979 Nov 15;100(1):95-7
PMID: 161695
-
Crystallography & NMR system: A new software suite for macromolecular structure determination.
Acta Crystallogr D Biol Crystallogr. 1998 Sep 1;54(Pt 5):905-21
PMID: 9757107
-
A gated channel into the proteasome core particle.
Nat Struct Biol. 2000 Nov;7(11):1062-7
PMID: 11062564
-
The HslU ATPase acts as a molecular chaperone in prevention of aggregation of SulA, an inhibitor of cell division in Escherichia coli.
FEBS Lett. 2000 Jul 21;477(3):224-9
PMID: 10908725
-
Crystal structure of the 20S proteasome from the archaeon T. acidophilum at 3.4 A resolution.
Science. 1995 Apr 28;268(5210):533-9
PMID: 7725097
-
Molecular chaperones: containers and surfaces for folding, stabilising or unfolding proteins.
Curr Opin Struct Biol. 2000 Apr;10(2):251-8
PMID: 10753820
-
AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes.
Genome Res. 1999 Jan;9(1):27-43
PMID: 9927482
-
Fibrinogen cleavage by the Streptococcus pyogenes extracellular cysteine protease and generation of antibodies that inhibit enzyme proteolytic activity.
Infect Immun. 1999 Sep;67(9):4326-33
PMID: 10456870
-
Structure of 20S proteasome from yeast at 2.4 A resolution.
Nature. 1997 Apr 3;386(6624):463-71
PMID: 9087403
-
Dissecting the role of a conserved motif (the second region of homology) in the AAA family of ATPases. Site-directed mutagenesis of the ATP-dependent protease FtsH.
J Biol Chem. 1999 Sep 10;274(37):26225-32
PMID: 10473576
-
Protein structure comparison by alignment of distance matrices.
J Mol Biol. 1993 Sep 5;233(1):123-38
PMID: 8377180
-
The proteasome.
Annu Rev Biophys Biomol Struct. 1999;28:295-317
PMID: 10410804
-
Raster3D: photorealistic molecular graphics.
Methods Enzymol. 1997;277:505-24
PMID: 18488322
-
HslV-HslU: A novel ATP-dependent protease complex in Escherichia coli related to the eukaryotic proteasome.
Proc Natl Acad Sci U S A. 1996 Jun 11;93(12):5808-13
PMID: 8650174
-
Identification and characterization of HsIV HsIU (ClpQ ClpY) proteins involved in overall proteolysis of misfolded proteins in Escherichia coli.
EMBO J. 1996 Dec 16;15(24):6899-909
PMID: 9003766
-
The structures of HsIU and the ATP-dependent protease HsIU-HsIV.
Nature. 2000 Feb 17;403(6771):800-5
PMID: 10693812
-
Crystal and solution structures of an HslUV protease-chaperone complex.
Cell. 2000 Nov 10;103(4):633-43
PMID: 11106733