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PMID: 1105583 Published · ppublish English Journal Article

Structure of yeast phenylalanine transfer RNA at 2.5 A resolution.

Ladner JE, Jack A, Robertus JD, Brown RS, Rhodes D, Clark BF, Klug A

Abstract

The x-ray analysis of the monoclinic form of yeast tRNAPhe has been taken to a resolution of 2.5 A by the method of isomorphous replacement. The model proposed at 3 A has been confirmed and extended to reveal additional features of the tertiary structure and of the stereochemistry. An extensive hydrogen bonding network is described involving specific interactions between bases and the ribose-phosphate backbone. The structure of a G-U base pair has been solved.

MeSH Terms
Base Sequence Hydrogen Bonding Models, Structural Nucleic Acid Conformation Phenylalanine RNA, Transfer Saccharomyces cerevisiae X-Ray Diffraction
Chemicals
Phenylalanine RNA, Transfer
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Ladner J E
Jack A
Robertus J D
Brown R S
Rhodes D
Clark B F
Klug A
References (15)
15 references, click to expand
  1. The geometry of nucleic acids.
    Prog Biophys Mol Biol. 1970;21:265-319 PMID: 4913289
  2. Studies on polynucleotides. LXXXII. Yeast phenylalanine transfer ribonucleic acid: partial digestion with ribonuclease T-1 and derivation of the total primary structure.
    J Biol Chem. 1968 Feb 10;243(3):598-608 PMID: 5637712
  3. The general structure of transfer RNA molecules.
    Proc Natl Acad Sci U S A. 1974 Dec;71(12):4970-4 PMID: 4612535
  4. The structural geometry of co-ordinated base changes in transfer RNA.
    J Mol Biol. 1974 Nov 5;89(3):511-6 PMID: 4613865
  5. Structure of yeast phenylalanine tRNA at 3 A resolution.
    Nature. 1974 Aug 16;250(467):546-51 PMID: 4602655
  6. The involvement of 5S RNA in the binding of tRNA to ribosomes.
    Biochem Biophys Res Commun. 1973 Oct 1;54(3):942-8 PMID: 4584885
  7. Three-dimensional tertiary structure of yeast phenylalanine transfer RNA.
    Science. 1974 Aug 2;185(4149):435-40 PMID: 4601792
  8. Energy refinement of hen egg-white lysozyme.
    J Mol Biol. 1974 Jan 25;82(3):393-420 PMID: 4856348
  9. Tryptophan transfer RNA as the UGA suppressor.
    J Mol Biol. 1971 Jun 14;58(2):439-58 PMID: 4933412
  10. Atomic co-ordinates for yeast phenylalanine tRNA.
    Nucleic Acids Res. 1975 Sep;2(9):1629-37 PMID: 1101229
  11. Accessible and inaccessible bases in yeast phenylalanine transfer RNA as studied by chemical modification.
    J Mol Biol. 1975 May 25;94(3):449-60 PMID: 1177304
  12. Conformation of the anticodon loop intRNA.
    Nature. 1967 Aug 19;215(5103):817-21 PMID: 6049728
  13. Codon--anticodon pairing: the wobble hypothesis.
    J Mol Biol. 1966 Aug;19(2):548-55 PMID: 5969078
  14. A guanosine and uridine specific reagent for study of base sequence in nucleic acids.
    Biochim Biophys Acta. 1965 Sep 6;108(1):159-61 PMID: 5862236
  15. Correlation between three-dimensional structure and chemical reactivity of transfer RNA.
    Nucleic Acids Res. 1974 Jul;1(7):927-32 PMID: 10793725
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1975-11-00
Pages
4414-8
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC388732
Subset
IM
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