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PMID: 11018277 Published · ppublish English Journal Article

The addition of low numbers of 3' thymine bases can be used to improve the hybridization signal of oligonucleotides for use within arrays on nylon supports.

Journal of microbiological methods ·Vol. 42 ·No. 2 ·2000-10-00 ·Pages 203-7

Brown TJ, Anthony RM

Abstract

Oligonucleotide arrays can be used for the analysis of microbial nucleic acid. The addition of high numbers of dTTP to the 3' ends of oligonucleotides using terminal transferase has been shown to facilitate membrane binding. This paper demonstrates low numbers of thymine bases added to the 3' end of oligonucleotides during synthesis can improve hybridisation signal intensity where the signal seen with the unmodified oligonucleotides is poor. Thus, the addition of variable numbers of thymine bases to different oligonucleotides allows the production of oligonucleotide arrays producing strong interpretable hybridisation signals.

MeSH Terms
Antibiotics, Antitubercular/pharmacology Drug Resistance, Microbial/genetics Membranes Mycobacterium tuberculosis/chemistry,drug effects Nucleic Acid Hybridization/methods Nylons Oligodeoxyribonucleotides/chemical synthesis,chemistry Oligonucleotide Array Sequence Analysis Point Mutation Rifampin/pharmacology Thymine/chemistry
Chemicals
Antibiotics, Antitubercular Nylons Oligodeoxyribonucleotides Thymine Rifampin
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Brown T J
Department of Microbiology, St. Thomas Hospital, Guy's and St. Thomas' Hospital Trust, London SE1 7EH, UK. timothy.brown@kcl.ac.uk
Anthony R M
Article Info
Journal
Journal of microbiological methods
Abbr.
J Microbiol Methods
ISSN
0167-7012
Published
2000-10-00
Pages
203-7
Language
English
Region
Netherlands
NLM ID
8306883
Subset
IM
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