Home LiteratureArticle Details
PMID: 1062781 Published · ppublish English Journal Article

Determination of nucleotide sequences beyond the sites of transcriptional termination.

Rosenberg M, de Chrombrugghe B, Musso R

Abstract

A procedure is described by which a discrete high-molecular-weight RNA transcription product can be used as a primer by DNA polymerase (DNA nucleotidyltransferase; EC 2.7.7.7; deoxynucleoside triphosphate: DNA deoxynucleotidyltransferase) for determining nucleic acid sequence in the template DNA beyond the 3'-terminus of the transcript. This procedure is applied to two lambda phage transcripts, the 4S "oop" RNA [Short l-strand RNA transcript from the region of origin of replication (ori) and the 6S RNA. Sequences of 35 and 19 nucleotides, respectively, following the sites at which these two transcripts terminate, are determined. Little structural homology is apparent in the template DNA beyond the 3'-ends of these two transcripts. The lack of homology suggests that this region might not be important to the termination process.

MeSH Terms
Base Sequence Coliphages DNA Nucleotidyltransferases/metabolism DNA, Viral/analysis RNA, Viral/metabolism Transcription, Genetic
Chemicals
DNA, Viral RNA, Viral DNA Nucleotidyltransferases
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Rosenberg M
de Chrombrugghe B
Musso R
References (18)
18 references, click to expand
  1. Small ribonucleic acids of Escherichia coli. I. Characterization by polyacrylamide gel electrophoresis and fingerprint analysis.
    J Biol Chem. 1973 Jul 25;248(14):5024-32 PMID: 4577761
  2. Novel properties of a restriction endonuclease isolated from Haemophilus parahaemolyticus.
    Proc Natl Acad Sci U S A. 1976 Feb;73(2):293-7 PMID: 1061131
  3. Direct determination of DNA nucleotide sequences: structure of a fragment of bacteriophage phiX172 DNA.
    J Mol Biol. 1974 Aug 15;87(3):377-407 PMID: 4374546
  4. Bacteriophage phi 80-induced low molecular weight RNA.
    Arch Biochem Biophys. 1972 Sep;152(1):152-65 PMID: 4342104
  5. Transcription termination and late control in phage lambda.
    Proc Natl Acad Sci U S A. 1975 Sep;72(9):3300-4 PMID: 1059112
  6. Determination of genes, restriction sites, and DNA sequences surrounding the 6S RNA template of bacteriophage lambda.
    Proc Natl Acad Sci U S A. 1975 May;72(5):1817-21 PMID: 1098044
  7. Termination of transcription in bacteriophage lambda. Heterogeneous, 3'-terminal oligo-adenylate additions and the effects of rho factor.
    J Biol Chem. 1975 Jun 25;250(12):4755-64 PMID: 1095576
  8. New features of the regulation of the tryptophan operon.
    Science. 1975 Jul 4;189(4196):22-6 PMID: 1094538
  9. Determination of a nucleotide sequence in bacteriophage f1 DNA by primed synthesis with DNA polymerase.
    J Mol Biol. 1974 Dec 5;90(2):315-33 PMID: 4616099
  10. Nucleotide sequencing of DNA: preliminary characterization of the products of specific cleavages at guanine, cytosine, or adenine residues (bacteriophage M13-ribosubstitution-DNA polymerase I-electrophoresis-two-dimensional fingerprinting).
    Proc Natl Acad Sci U S A. 1972 Jan;69(1):238-42 PMID: 4500550
  11. Nucleotide sequences of the 5' and 3' termini of bacteriophage T7 early messenger RNAs synthesized in vivo: evidence for sequence specificity in RNA processing.
    J Mol Biol. 1974 Nov 15;89(4):767-76 PMID: 4449132
  12. Oligo(A) not coded by DNA generating 3'-terminal heterogeneity in a lambda phage RNA.
    J Biol Chem. 1975 Jun 25;250(12):4818-21 PMID: 167007
  13. Control of short leftward transcripts from the immunity and ori regions in induced coliphage lambda.
    Mol Gen Genet. 1973 Nov 22;126(4):275-90 PMID: 4784811
  14. Studies on polynucleotides. CXXII. The dodecanucleotide sequence adjoining the C-C-A end of the tyrosine transfer ribonucleic acid gene.
    J Biol Chem. 1973 May 25;248(10):3489-99 PMID: 4702874
  15. A convenient program for the rapid calculation of sedimentation coefficients in linear salt or sucrose gradients.
    Anal Biochem. 1972 Sep;49(1):124-33 PMID: 5081095
  16. Nucleotide sequence of a ribonucleic acid transcribed in vitro from lambda phage deoxyribonucleic acid.
    J Biol Chem. 1971 Aug 25;246(16):5120-39 PMID: 4936723
  17. Chromatography of 32P-labelled oligonucleotides on thin layers of DEAE-cellulose.
    Eur J Biochem. 1969 Dec;11(2):395-9 PMID: 4902612
  18. Termination factor for RNA synthesis.
    Nature. 1969 Dec 20;224(5225):1168-74 PMID: 4902144
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1976-03-00
Pages
717-21
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC335989
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com