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PMID: 10502512 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

Structure of the human adenovirus serotype 2 fiber head domain at 1.5 A resolution.

Virology ·Vol. 262 ·No. 2 ·1999-09-30 ·Pages 333-43

van Raaij MJ, Louis N, Chroboczek J, Cusack S

Abstract

Adenovirus binds to its receptor via the head domain of its fiber protein. We have crystallized the adenovirus serotype 2 (subgroup C) receptor binding domain and solved the structure at 1.5 A resolution by the molecular replacement technique using the known adenovirus type 5 head structure. Included in the high-resolution model are 306 water molecules, five alternative side chain conformations, and individual anisotropic temperature factors for each atom. The overall structure of the serotype 2 head is very similar to its serotype 5 homologue, apart from differences in some of the flexible loops. All but subgroup B adenoviruses are believed to use the recently identified protein CAR (Coxsackievirus and adenovirus receptor) as receptor. By comparison of the two structures and sequence alignment of CAR binding and non-CAR binding serotype fiber heads, we discuss possible receptor binding sites and propose a receptor binding site in a crevice between two monomers on the side of the trimer. The structural basis of the extraordinary stability of the fiber head trimer is also discussed.

MeSH Terms
Adenoviruses, Human/chemistry,classification,genetics Amino Acid Sequence Baculoviridae/genetics Binding Sites Capsid/chemistry,genetics,isolation & purification Capsid Proteins Crystallization Crystallography, X-Ray Electrons Hydrogen Bonding Models, Molecular Molecular Sequence Data Protein Binding Protein Structure, Secondary Receptors, Virus/metabolism Recombinant Proteins/chemistry,genetics,isolation & purification Sequence Alignment Temperature Water
Chemicals
Capsid Proteins Receptors, Virus Recombinant Proteins adenovirus receptor hexon capsid protein, Adenovirus Water
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
van Raaij M J
c/o Institut Laue Langevin, 6 rue Jules Horowitz, Grenoble Cedex 9, 38000, France.
Louis N
Chroboczek J
Cusack S
Article Info
Journal
Virology
Abbr.
Virology
ISSN
0042-6822
Published
1999-09-30
Pages
333-43
Language
English
Region
United States
NLM ID
0110674
Subset
IM
Databases
PDB
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