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PMID: 10393928 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Time-resolved analysis and visualization of dynamic processes in living cells.

Tvaruskó W, Bentele M, Misteli T, Rudolf R, Kaether C, Spector DL, Gerdes HH, Eils R

Abstract

Recent development of in vivo microscopy techniques, including green fluorescent proteins, has allowed the visualization of a wide range of dynamic processes in living cells. For quantitative and visual interpretation of such processes, new concepts for time-resolved image analysis and continuous time-space visualization are required. Here, we describe a versatile and fully automated approach consisting of four techniques, namely highly sensitive object detection, fuzzy logic-based dynamic object tracking, computer graphical visualization, and measurement in time-space. Systematic model simulations were performed to evaluate the reliability of the automated object detection and tracking method. To demonstrate potential applications, the method was applied to the analysis of secretory membrane traffic and the functional dynamics of nuclear compartments enriched in pre-mRNA splicing factors.

MeSH Terms
Animals Biology/methods Cell Physiological Phenomena Chlorocebus aethiops Chromogranins/analysis,genetics Computer Simulation Green Fluorescent Proteins Humans Luminescent Proteins/analysis,genetics Microscopy/methods Models, Biological Recombinant Fusion Proteins/analysis Time Factors Transfection Vero Cells
Chemicals
Chromogranins Luminescent Proteins Recombinant Fusion Proteins Green Fluorescent Proteins
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Tvaruskó W
Bioinformatics Group, Interdisciplinary Center of Scientific Computing, 69120 Heidelberg, Germany.
Bentele M
Misteli T
Rudolf R
Kaether C
Spector D L
Gerdes H H
Eils R
References (8)
8 references, click to expand
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Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1999-07-06
Pages
7950-5
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC22168
Subset
IM
Grants
NIGMS NIH HHS · R01 GM042694 · United States
PHS HHS · 42694 · United States
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