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PMID: 10373319 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Zebrafish genetic map with 2000 microsatellite markers.

Genomics ·Vol. 58 ·No. 3 ·1999-06-15 ·Pages 219-32

Shimoda N, Knapik EW, Ziniti J, Sim C, Yamada E, Kaplan S, Jackson D, de Sauvage F, Jacob H, Fishman MC

Abstract

The zebrafish is the first vertebrate organism used for large-scale genetic screens seeking genes critical to development. These screens have been quite successful, with more than 1800 recessive mutations discovered that speak to morphogenesis of the vertebrate embryo. The cloning of the mutant genes depends on a dense genetic map. The 2000 markers we present here, using microsatellite (CA) repeats, provides 1.2-cM average resolution. One centimorgan in zebrafish is about 0. 74 megabase, so, for many mutations, these markers are close enough to begin positional cloning by YAC walks.

MeSH Terms
Animals Cloning, Molecular Female Gene Library Genetic Linkage Genome Male Microsatellite Repeats/genetics Mutation Physical Chromosome Mapping Zebrafish/genetics
Authors & Affiliations
10 authors, click to expand affiliations / ORCID
Shimoda N
Cardiovascular Research Center, Massachusetts General Hospital, Charlestown, Massachusetts 02129, USA.
Knapik E W
Ziniti J
Sim C
Yamada E
Kaplan S
Jackson D
de Sauvage F
Jacob H
Fishman M C
Article Info
Journal
Genomics
Abbr.
Genomics
ISSN
0888-7543
Published
1999-06-15
Pages
219-32
Language
English
Region
United States
NLM ID
8800135
Subset
IM
Grants
NIDDK NIH HHS · DK55383 · United States
NHLBI NIH HHS · HL49579 · United States
NCRR NIH HHS · RR08888 · United States
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