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PMID: 10371154 Published · ppublish English Journal Article

Analysis of gene expression data using self-organizing maps.

FEBS letters ·Vol. 451 ·No. 2 ·1999-05-21 ·Pages 142-6

Törönen P, Kolehmainen M, Wong G, Castrén E

Abstract

DNA microarray technologies together with rapidly increasing genomic sequence information is leading to an explosion in available gene expression data. Currently there is a great need for efficient methods to analyze and visualize these massive data sets. A self-organizing map (SOM) is an unsupervised neural network learning algorithm which has been successfully used for the analysis and organization of large data files. We have here applied the SOM algorithm to analyze published data of yeast gene expression and show that SOM is an excellent tool for the analysis and visualization of gene expression profiles.

MeSH Terms
Algorithms Chromosome Mapping/methods Cluster Analysis Databases, Factual Gene Expression Molecular Biology Neural Networks, Computer Software
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Törönen P
A.I. Virtanen Institute, University of Kuopio, Finland.
Kolehmainen M
Wong G
Castrén E
Article Info
Journal
FEBS letters
Abbr.
FEBS Lett
ISSN
0014-5793
Published
1999-05-21
Pages
142-6
Language
English
Region
England
NLM ID
0155157
Subset
IM
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