WBP1 (WW domain binding protein 1)

symbol
WBP1
locus group
protein-coding gene
location
2p13.1
gene_family
-
alias symbol
WBP-1
alias name
None
entrez id
23559
ensembl gene id
ENSG00000239779
ucsc gene id
uc002slj.3
refseq accession
NM_012477
hgnc_id
HGNC:12737
approved reserved
1999-11-26
2p13.1
ChineseEnglish

WBP1, or WW domain-binding protein 1, is a multifunctional adaptor protein belonging to the WBP family, characterized by the presence of multiple PPXY (proline-proline-any amino acid-tyrosine) motifs that serve as critical docking sites for proteins containing WW domains, such as members of the Nedd4 family of E3 ubiquitin ligases. By mediating these specific protein-protein interactions, WBP1 acts as a central hub in cellular signaling, facilitating the ubiquitination of target proteins and thereby regulating their stability through the ubiquitin-proteasome system. This mechanism allows WBP1 to modulate diverse biological processes, including cell proliferation, differentiation, apoptosis, and cell cycle progression, with its functional activity localized primarily in both the cytoplasm and the nucleus. The protein is widely expressed across various tissues, exhibiting particularly high abundance in the brain, heart, and skeletal muscle, and it plays a pivotal role in transducing signals within key pathways such as Notch and TGF-β. In the context of disease, WBP1 has emerged as a significant player in oncology and neurodegeneration; for instance, its overexpression in breast cancer and glioma can promote tumor invasion and metastasis by enhancing the activation of the ErbB2/Her2 pathway and disrupting cell cycle checkpoints, whereas its knockdown inhibits cancer cell migration. Conversely, dysregulated WBP1 expression, including loss-of-function mutations that impair its binding capacity, has been linked to compromised signaling integrity, potentially contributing to cardiovascular abnormalities and neurodegenerative conditions, highlighting its dual role as a regulator of both homeostasis and pathological progression.

Nucleotide sequence of WBP1:[NCBI]
Loading Gene Browser...
Protein Sequence
1MARASSGNGS EEAWGALRAP QQQLRELCPG VNNQPYLCES
41GHCCGETGCC TYYYELWWFW LLWTVLILFS CCCAFRHRRA
81 KLRLQQQQR QREINLLAYH GACHGAGPFP TGSLLDLRFL
121STFKPPAYED VVHRPGTPPP PYTVAPGRPL TASSEQTCCS
161S SSSCPAHF EGTNVEGVSS HQSAPPHQEG EPGAGVTPAS
201TPPSCRYRRL TGDSGIELCP CPASGEGEPV KEVRVSATLP
241DL EDYSPCA LPPESVPQIF PMGLSSSEGD IP
Structure predicted by AlphaFold DB(UniProt: Q96G27). Color indicates pLDDT confidence (dark blue = high, yellow/orange = low).
SNP variants of WBP1:           Showing partial SNPs
rs4686       rs8469       rs9658       rs11735       rs1051283       rs1054217       rs1054223       rs1054226       rs2270016       rs3191651       rs7420093       rs11544846       rs34174194       rs61733470       rs61735750       rs61735753       rs71406873      
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
TATGAGCTCTGGTGGTTCTG
59
TGAGTTTAGCTCGTCGGTG
60
TTCAACACTCCTCTCAGCA
59
CTCTCGAAGACAATCCCAC
58
ATGAGCTCTGGTGGTTCTG
59
CTGAGTTTAGCTCGTCGGT
60
AACACTCCTCTCAGCATCC
59
AGCTCTCGAAGACAATCCC
59
ATGAGCTCTGGTGGTTCTG
59
TGAGTTTAGCTCGTCGGTG
60
CACTCCTCTCAGCATCCTC
59
ACAGCTCTCGAAGACAATCC
60
Transcription Factors
Target Gene
Interaction Type
PubMed References
ATF6
WBP1
Activation

Subcellular localization of WBP1 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for WBP1:

GO ID
Protein
Source DB
GO:0016021
A8MX15 (UniProtKB)
IEA
GO:0016021
B8ZZ95 (UniProtKB)
IEA
GO:0016021
C9JLM6 (UniProtKB)
IEA
GO:0005515
Q96G27 (UniProtKB)
IPI
GO:0005515
Q96G27 (UniProtKB)
IPI
GO:0005575
Q96G27 (UniProtKB)
ND
GO:0008150
Q96G27 (UniProtKB)
ND
GO:0050699
Q96G27 (UniProtKB)
ISS
GO:0050699
Q96G27 (UniProtKB)
IPI

microRNAs potentially regulating WBP1:     

String
BioGrid
IntAct
mentha
MINT
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Interacting Gene Interaction Source/Score
wbp-encoded LPS O-antigen architecture as a prognostic and therapeutic target in Pseudomonas aeruginosa keratitis.
Wei M, Zhang Z, Zhao X, Xu B, Shi Q, Cheng Z, Xu X, Wei Z, Lu X, Li L, Liang Q EBioMedicine IF: 11.2 2026-08-11
Evaluating the intrinsic adulticidal properties of a few commercial wall paints on Anopheles stephensi mosquitoes.
Singh B, Kumar D, Sharma S, Soni M, Gupta SK, Singh K, Singh H J Vector Borne Dis IF: 1.4 2025-10-16
Integrative scRNA-seq and transcriptomic analysis initially reveals monocyte/macrophage activation drives EV-A71-induced immune dysregulation and neural injury in severe HFMD.
Wang M, Zhang M, Deng H, Zhang Y, Liu C, Chen Y, Zhang C, Zhang W, Jia X, Dang S, Li Y Front Immunol IF: 7.0 2025-00-00
WBP1 regulates mitochondrial function and ferroptosis to modulate chemoresistance in colorectal cancer.
Wang Y, Qi D, Ge G, Cao N, Liu X, Zhu N, Li F, Huang X, Yu K, Zheng J, Wang D, Yao W, Chen L, Dong Z Mol Med IF: 8.3 2025-03-12
Distinct microbes, metabolites, and the host genome define the multi-omics profiles in right-sided and left-sided colon cancer.
Liang L, Kong C, Li J, Liu G, Wei J, Wang G, Wang Q, Yang Y, Shi D, Li X, Ma Y Microbiome IF: 14.9 2024-12-28
Comprehensive analysis of TLX2 in pan cancer as a prognostic and immunologic biomarker and validation in ovarian cancer.
Chen B, Ding X, Wan A, Qi X, Lin X, Wang H, Mu W, Wang G, Zheng J Sci Rep IF: 4.9 2023-00-27
Molecular basis for glycan recognition and reaction priming of eukaryotic oligosaccharyltransferase.
Ramírez AS, de Capitani M, Pesciullesi G, Kowal J, Bloch JS, Irobalieva RN, Reymond JL, Aebi M, Locher KP Nat Commun IF: 15.7 2022-00-26
Cex1 is a component of the COPI intracellular trafficking machinery.
Enkler L, Rinaldi B, de Craene JO, Hammann P, Nureki O, Senger B, Friant S, Becker HD Biol Open IF: 1.8 2021-00-22
Towards deorphanizing G protein-coupled receptors of Schistosoma mansoni using the MALAR yeast two-hybrid system.
Weth O, Haeberlein S, Haimann M, Zhang Y, Grevelding CG Parasitology IF: 2.5 2020-00-00
The atomic structure of a eukaryotic oligosaccharyltransferase complex.
Bai L, Wang T, Zhao G, Kovach A, Li H Nature IF: 56.1 2018-00-15

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