RCC1 (regulator of chromosome condensation 1)

symbol
RCC1
locus group
protein-coding gene
location
1p35.3
gene_family
-
alias symbol
-
alias name
None
entrez id
1104
ensembl gene id
ENSG00000180198
ucsc gene id
uc001bqc.2
refseq accession
NM_001269
hgnc_id
HGNC:1913
approved reserved
1986-01-01
1p35.3
ChineseEnglish

RCC1 (Regulator of Chromosome Condensation 1) encodes a critical nuclear chromatin-binding protein that serves as a master regulator of cell cycle progression, particularly during mitosis. As a member of the Ran GTPase effector protein family, the RCC1 protein contains a conserved RCC1 domain, also known as a beta-helix repeat domain, which enables it to bind and activate the small GTPase Ran. This activation is essential for the spatial and temporal regulation of nuclear-cytoplasmic transport and the assembly of the mitotic spindle, ensuring the proper condensation of chromosomes and their accurate segregation into daughter cells. By orchestrating the GTPase cycle of Ran, RCC1 maintains genomic stability; consequently, mutations or dysregulation of this gene can lead to chromosome instability, aneuploidy, and cell cycle arrest, thereby predisposing cells to apoptosis or uncontrolled proliferation. The abnormal expression of RCC1 has been strongly implicated in the pathogenesis of various malignancies, including breast, lung, and colorectal cancers, where its overexpression often correlates with enhanced tumor growth and development, while reduced expression may trigger cell cycle checkpoints. Beyond its role in mitosis, RCC1 participates in broader cellular processes such as gene expression regulation and DNA repair, highlighting its central importance in maintaining cellular homeostasis. Disruptions in RCC1 function can have systemic consequences, contributing to developmental defects, immune system disorders, and cancer initiation, underscoring its vital role in both normal physiology and disease pathology.

Nucleotide sequence of RCC1:[NCBI]
Loading Gene Browser...
Protein Sequence
1MSPKRIAKRR SPPADAIPKS KKVKVSHRSH STEPGLVLTL
41GQGDVGQLGL GENVMERKKP ALVSIPEDVV QAEAGGMHTV
81 CLSKSGQVY SFGCNDEGAL GRDTSVEGSE MVPGKVELQE
121KVVQVSAGDS HTAALTDDGR VFLWGSFRDN NGVIGLLEPM
161K KSMVPVQV QLDVPVVKVA SGNDHLVMLT ADGDLYTLGC
201GEQGQLGRVP ELFANRGGRQ GLERLLVPKC VMLKSRGSRG
241HV RFQDAFC GAYFTFAISH EGHVYGFGLS NYHQLGTPGT
281ESCFIPQNLT SFKNSTKSWV GFSGGQHHTV CMDSEGKAYS
321LGR AEYGRL GLGEGAEEKS IPTLISRLPA VSSVACGASV
361GYAVTKDGRV FAWGMGTNYQ LGTGQDEDAW SPVEMMGKQL
401ENRV VLSVS SGGQHTVLLV KDKEQS
Structure predicted by AlphaFold DB(UniProt: P18754). Color indicates pLDDT confidence (dark blue = high, yellow/orange = low).
SNP variants of RCC1:           Showing partial SNPs
rs762447       rs1051376       rs1131661       rs1131664       rs2066726       rs2105811       rs2227976       rs2227977       rs2402231       rs2515638       rs2795319       rs2795321       rs2795322       rs2840757       rs2840758       rs2840759       rs2840761      

Tissue expression of RCC1:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
CATTCCGGAGGATGTTGTG
58
GAAGGAATAGACCTGGCCA
58
CTCTTCCACACTTCCCAGAG
60
GTTATTGTCCTTGGAAACTCTGAG
60
GCATACCCACCCTCATCTC
60
AAACACGACCATCCTTGGT
60
GCATACCCACCCTCATCTC
60
AAACACGACCATCCTTGGT
60
AGAAGGTGAAGGACACGAG
59
CATCACATTCTCACCCAGC
59
AGAAGGTGAAGGACACGAG
59
CATCACATTCTCACCCAGC
59
GCATACCCACCCTCATCTC
60
AAACACGACCATCCTTGGT
60
AGAAGGTGAAGGTCTCACAC
59
CATCACATTCTCACCCAGC
59
AGAAGGTGAAGGTCTCACAC
59
CATCACATTCTCACCCAGC
59
AGAAGGTGAAGGTCTCACAC
59
CATCACATTCTCACCCAGC
59
Transcription Factors
Target Gene
Interaction Type
PubMed References
MYC
RCC1
Unknown

Subcellular localization of RCC1 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for RCC1:

GO ID
Protein
Source DB
GO:0005654
C9J3R0 (UniProtKB)
IDA
GO:0005654
C9JMJ4 (UniProtKB)
IDA
GO:0031965
C9JMJ4 (UniProtKB)
IDA
GO:0005654
C9JQZ4 (UniProtKB)
IDA
GO:0031965
C9JQZ4 (UniProtKB)
IDA
GO:0005654
C9JRH2 (UniProtKB)
IDA
GO:0031965
C9JRH2 (UniProtKB)
IDA
GO:0005654
C9JW69 (UniProtKB)
IDA
GO:0031965
C9JW69 (UniProtKB)
IDA
GO:0000082
P18754 (UniProtKB)
IMP
GO:0000790
P18754 (UniProtKB)
IDA
GO:0000794
P18754 (UniProtKB)
IDA
GO:0003682
P18754 (UniProtKB)
IDA
GO:0005087
P18754 (UniProtKB)
IDA
GO:0005087
P18754 (UniProtKB)
TAS
GO:0005515
P18754 (UniProtKB)
IPI
GO:0005515
P18754 (UniProtKB)
IPI
GO:0005515
P18754 (UniProtKB)
IPI
GO:0005515
P18754 (UniProtKB)
IPI
GO:0005515
P18754 (UniProtKB)
IPI
GO:0005515
P18754 (UniProtKB)
IPI
GO:0005515
P18754 (UniProtKB)
IPI
GO:0005634
P18754 (UniProtKB)
IDA
GO:0005634
P18754 (UniProtKB)
IDA
GO:0005654
P18754 (UniProtKB)
IDA
GO:0005654
P18754 (UniProtKB)
TAS
GO:0005737
P18754 (UniProtKB)
IDA
GO:0007052
P18754 (UniProtKB)
IDA
GO:0007059
P18754 (UniProtKB)
IMP
GO:0007067
P18754 (UniProtKB)
IEA
GO:0007088
P18754 (UniProtKB)
IDA
GO:0016032
P18754 (UniProtKB)
TAS
GO:0031492
P18754 (UniProtKB)
IDA
GO:0031965
P18754 (UniProtKB)
IDA
GO:0042393
P18754 (UniProtKB)
IDA
GO:0043547
P18754 (UniProtKB)
IEA
GO:0043547
P18754 (UniProtKB)
IEA
GO:0051225
P18754 (UniProtKB)
IMP
GO:0051301
P18754 (UniProtKB)
IEA

microRNAs potentially regulating RCC1:     

String
BioGrid
IntAct
mentha
MINT
Reactome
Loading…
Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Retinitis Pigmentosa 0.002995792 2 0 BeFree_LHGDN
Malignant neoplasm of breast 0.001357209 5 0 BeFree
X-linked retinitis pigmentosa 0.001085767 4 0 BeFree
Breast Carcinoma 0.001085767 4 0 BeFree
Malignant neoplasm of prostate 0.000814326 3 0 BeFree
Prostate carcinoma 0.000814326 3 0 BeFree
Carcinogenesis 0.000542884 2 0 BeFree
oligodendroglioma 0.000271442 1 0 BeFree
Oxyphilic Adenoma 0.000271442 1 0 BeFree
Pancreatic carcinoma 0.000271442 1 0 BeFree
The ZmBBM2-BBIP1-RCC1-4 module enhances callus growth and genetic transformation efficiency in maize.
Fu Q, Wei Q, Qi C, Zhao A, Yuan X, Yuan Y, Liu Y Plant Physiol IF: 8.2 2026-07-02
Targeted decoupling of FTO interaction with RCC1 reprograms wood composition and confers UV-B tolerance in poplar.
Wang M, Li H, Chen Y, Su N, Zhang D, Song Y New Phytol IF: 8.7 2026-05-00
The role of HECT-type E3 ubiquitin ligases in inflammation.
Wang Z, Wang P, Xie H, You Z, Liu X, Cao F, Yao S Front Immunol IF: 7.0 None
Transcriptome-wide association studies implicate RCC1 and PHACTR4 in prostate cancer survival.
Fu W, Rothstein JH, Melander O, Lilja H, Sieh W, Song X, Klein RJ Eur J Hum Genet IF: 4.6 2026-08-00
Full-length transcriptome analysis identifies SpRCC1 as a positive regulator of growth in Spathiphyllum kochii.
Lin H, Wang X, Xu K, Ni Z, Li L, Zhou H, Lin F, Xu X, Xiao J, Zhu N, Ge D, Xu W Front Plant Sci IF: 5.9 None
RCBTB2 in cancer: context-dependent functions and translational boundaries.
Cai C, Du J, Tu L, Li W, Mo R Front Oncol IF: 3.4 2026-00-00
Tracing the evolutionary history of small HERCs reveals an unprecedented expansion in fish related to virus infection.
Wu MY, Gong XY, Guo WH, Luan HY, Zhao ZY, Dan C, Zhang YB Fish Shellfish Immunol IF: 4.2 2026-09-00
Functional Insights into the RCC1 Gene Family and UVR8-Mediated Regulation of Anthocyanin Biosynthesis in Grapevine.
Ali H, Xu Q, Fu J, Zhao W, Bian L, Xu Y, Wang Q, Zhang Y, Zhou X, Jia X, Tong Y, Xu Y, Xu T Plants (Basel) IF: 4.7 2026-05-31

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