ERCC3 (ERCC excision repair 3, TFIIH core complex helicase subunit)

symbol
ERCC3
locus group
protein-coding gene
location
2q14.3
gene_family
General transcription factors
alias symbol
XPB|BTF2|RAD25|Ssl2
alias name
xeroderma pigmentosum group B comp…
entrez id
2071
ensembl gene id
ENSG00000163161
ucsc gene id
uc002toh.1
refseq accession
NM_000122
hgnc_id
HGNC:3435
approved reserved
2001-06-22
2q14.3
ChineseEnglish

ERCC3, also known as Excision Repair Cross-Complementation Group 3, encodes the Xeroderma Pigmentosum Group B (XPB) protein, a critical ATP-dependent DNA helicase that functions as an essential subunit of the general transcription factor IIH (TFIIH) complex. As a member of the SF2 helicase superfamily, XPB utilizes the energy derived from ATP hydrolysis to unwind the DNA double helix at the transcription start site, a dual function that is indispensable for both the initiation of RNA polymerase II-mediated transcription and the nucleotide excision repair (NER) pathway. In the context of NER, XPB facilitates the opening of the DNA duplex to allow the recognition and removal of bulky DNA lesions, such as those induced by ultraviolet radiation, thereby preventing the accumulation of mutagenic damage. Mutations in ERCC3 are associated with a spectrum of severe autosomal recessive disorders, including Xeroderma Pigmentosum (XP), Cockayne Syndrome (CS), and Trichothiodystrophy (TTD), which are clinically characterized by extreme sensitivity to UV light, progressive neurological degeneration, and premature aging phenotypes resulting from the cellular inability to repair DNA damage. Beyond its role in maintenance repair, ERCC3 expression levels are tightly regulated and have significant implications for oncogenesis; while downregulation compromises genomic stability and increases mutation rates, aberrant expression or mutations can alter cell cycle checkpoints and modulate cellular sensitivity to chemotherapeutic agents that exploit NER mechanisms. The protein acts in concert with other ERCC family members, particularly ERCC2 (XPD), to coordinate the repair process, making ERCC3 a pivotal target for understanding the molecular basis of genome stability, transcriptional regulation, and the development of therapeutic strategies for DNA repair-deficient diseases and cancer.

Nucleotide sequence of ERCC3:[NCBI]
Loading Gene Browser...
Protein Sequence
1MGKRDRADRD KKKSRKRHYE DEEDDEEDAP GNDPQEAVPS
41AAGKQVDESG TKVDEYGAKD YRLQMPLKDD HTSRPLWVAP
81 DGHIFLEAF SPVYKYAQDF LVAIAEPVCR PTHVHEYKLT
121AYSLYAAVSV GLQTSDITEY LRKLSKTGVP DGIMQFIKLC
161T VSYGKVKL VLKHNRYFVE SCHPDVIQHL LQDPVIRECR
201LRNSEGEATE LITETFTSKS AISKTAESSG GPSTSRVTDP
241QG KSDIPMD LFDFYEQMDK DEEEEEETQT VSFEVKQEMI
281EELQKRCIHL EYPLLAEYDF RNDSVNPDIN IDLKPTAVLR
321PYQ EKSLRK MFGNGRARSG VIVLPCGAGK SLVGVTAACT
361VRKRCLVLGN SAVSVEQWKA QFKMWSTIDD SQICRFTSDA
401KDKP IGCSV AISTYSMLGH TTKRSWEAER VMEWLKTQEW
441GLMILDEVHT IPAKMFRRVL TIVQAHCKLG LTATLVREDD
481KIVDL NFLI GPKLYEANWM ELQNNGYIAK VQCAEVWCPM
521SPEFYREYVA IKTKKRILLY TMNPNKFRAC QFLIKFHERR
561NDKIIV FAD NVFALKEYAI RLNKPYIYGP TSQGERMQIL
601QNFKHNPKIN TIFISKVGDT SFDLPEANVL IQISSHGGSR
641RQEAQRL GR VLRAKKGMVA EEYNAFFYSL VSQDTQEMAY
681STKRQRFLVD QGYSFKVITK LAGMEEEDLA FSTKEEQQQL
721LQKVLAAT D LDAEEEVVAG EFGSRSSQAS RRFGTMSSMS
761GADDTVYMEY HSSRSKAPSK HVHPLFKRFR K
Structure predicted by AlphaFold DB(UniProt: P19447). Color indicates pLDDT confidence (dark blue = high, yellow/orange = low).
SNP variants of ERCC3:           Showing partial SNPs
rs1011019       rs1143407       rs1566823       rs1803541       rs1805161       rs1805162       rs2134794       rs2174272       rs2228544       rs2271026       rs2276583       rs2276584       rs2404534       rs3738948       rs3768866       rs3817088       rs4150398      

Tissue expression of ERCC3:    [UniProt]

Gene expression across tissues
Forward Primer
Forward Tm
Reverse Primer
Reverse Tm
Score
GTCAAGCAGGAAATGATTGAG
58
TCCGGAAGTCATATTCTGC
57
TCCCTGATGGAATTATGCAG
57
CAACGAAGTATCTGTTGTGC
57
AAGCACAACAGATACTTCGT
57
GTTTCTTAAGCGGCATTCTC
57
GGGAAAGGATGCAAATTCTC
57
AAGTGTCACCTACCTTGGA
58
AAATCTGCCCACCTACCTC
59
CTGTGGATCTGTCACTCGG
60
GTTGTGTACTGTCAGCTATGG
58
TGGAATCTCTTACCTGTTGTG
57
GAATTTGGCTCCAGATCCAG
59
CAGACATAGAACTCATGGTGC
59
CGCGACAAGAAGAAATCCA
58
GCGTCCTCTTCATCATCCT
59
GACTACAGGCTGCAAATGC
60
GTGATGTCACTGGTTTGCA
59
GGGAAAGGATGCAAATTCTC
57
AAGTGTCACCTACCTTGGA
58

Subcellular localization of ERCC3 (and its protein):

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • plasma membrane
  • cytoplasm
  • extracellular
  • golgi
  • vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • nucleus
  • endosome
  • lysosome
  • mitochondrion

Gene Ontology (GO) terms for ERCC3:

GO ID
Protein
Source DB
GO:0000439
P19447 (UniProtKB)
IEA
GO:0000717
P19447 (UniProtKB)
IMP
GO:0000717
P19447 (UniProtKB)
TAS
GO:0001666
P19447 (UniProtKB)
IEA
GO:0003677
P19447 (UniProtKB)
TAS
GO:0003684
P19447 (UniProtKB)
NAS
GO:0004003
P19447 (UniProtKB)
IEA
GO:0004386
P19447 (UniProtKB)
TAS
GO:0004386
P19447 (UniProtKB)
TAS
GO:0004386
P19447 (UniProtKB)
TAS
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005515
P19447 (UniProtKB)
IPI
GO:0005524
P19447 (UniProtKB)
IEA
GO:0005525
P19447 (UniProtKB)
IEA
GO:0005634
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
IDA
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005654
P19447 (UniProtKB)
TAS
GO:0005675
P19447 (UniProtKB)
TAS
GO:0005675
P19447 (UniProtKB)
IDA
GO:0005675
P19447 (UniProtKB)
IDA
GO:0006265
P19447 (UniProtKB)
IMP
GO:0006281
P19447 (UniProtKB)
IMP
GO:0006283
P19447 (UniProtKB)
IDA
GO:0006283
P19447 (UniProtKB)
TAS
GO:0006289
P19447 (UniProtKB)
IMP
GO:0006293
P19447 (UniProtKB)
TAS
GO:0006294
P19447 (UniProtKB)
TAS
GO:0006294
P19447 (UniProtKB)
TAS
GO:0006294
P19447 (UniProtKB)
TAS
GO:0006295
P19447 (UniProtKB)
TAS
GO:0006296
P19447 (UniProtKB)
TAS
GO:0006361
P19447 (UniProtKB)
TAS
GO:0006361
P19447 (UniProtKB)
TAS
GO:0006362
P19447 (UniProtKB)
TAS
GO:0006363
P19447 (UniProtKB)
TAS
GO:0006366
P19447 (UniProtKB)
IMP
GO:0006366
P19447 (UniProtKB)
IDA
GO:0006366
P19447 (UniProtKB)
TAS
GO:0006367
P19447 (UniProtKB)
TAS
GO:0006367
P19447 (UniProtKB)
TAS
GO:0006368
P19447 (UniProtKB)
TAS
GO:0006368
P19447 (UniProtKB)
TAS
GO:0006368
P19447 (UniProtKB)
TAS
GO:0006368
P19447 (UniProtKB)
TAS
GO:0006370
P19447 (UniProtKB)
TAS
GO:0006468
P19447 (UniProtKB)
IEA
GO:0006915
P19447 (UniProtKB)
IMP
GO:0006979
P19447 (UniProtKB)
IMP
GO:0008022
P19447 (UniProtKB)
IPI
GO:0008022
P19447 (UniProtKB)
IPI
GO:0008104
P19447 (UniProtKB)
IMP
GO:0008134
P19447 (UniProtKB)
IDA
GO:0009411
P19447 (UniProtKB)
IMP
GO:0009650
P19447 (UniProtKB)
IEA
GO:0016032
P19447 (UniProtKB)
IEA
GO:0016887
P19447 (UniProtKB)
IDA
GO:0032564
P19447 (UniProtKB)
IEA
GO:0033683
P19447 (UniProtKB)
IMP
GO:0033683
P19447 (UniProtKB)
IMP
GO:0033683
P19447 (UniProtKB)
TAS
GO:0035315
P19447 (UniProtKB)
IMP
GO:0042277
P19447 (UniProtKB)
IEA
GO:0043065
P19447 (UniProtKB)
IDA
GO:0043138
P19447 (UniProtKB)
IDA
GO:0043138
P19447 (UniProtKB)
IMP
GO:0045944
P19447 (UniProtKB)
IDA
GO:0047485
P19447 (UniProtKB)
IPI
GO:0047485
P19447 (UniProtKB)
IPI
GO:0047485
P19447 (UniProtKB)
IPI
GO:0048568
P19447 (UniProtKB)
IEA
GO:0070911
P19447 (UniProtKB)
TAS
GO:1901990
P19447 (UniProtKB)
IMP
GO:0004672
P19447 (UniProtKB)
IDA
GO:0008094
P19447 (UniProtKB)
IMP
GO:0008094
P19447 (UniProtKB)
IDA
GO:0008353
P19447 (UniProtKB)
IDA

microRNAs potentially regulating ERCC3:     

String
BioGrid
IntAct
mentha
MINT
Reactome
Loading…
Interacting Gene Interaction Source/Score
Disease Score NofPmids NofSnps Source
Disease Score NofPmids NofSnps Source
Xeroderma pigmentosum, group B 0.441085767 5 0 BeFree_CTD_human_MGD_ORPHANET_UNIPROT
Trichothiodystrophy Syndromes 0.126786047 25 0 BeFree_ORPHANET
Peripheral Neuropathy 0.12 1 0 CTD_human
Photosensitive Trichothiodystrophy 0.12 0 0 CTD_human
Arsenic Poisoning 0.12 1 0 CTD_human
Xeroderma Pigmentosum B/Cockayne Syndrome 0.12 0 3 CLINVAR
Asphyxia Neonatorum 0.08 1 0 RGD
Xeroderma Pigmentosum 0.013767591 42 0 BeFree_GAD
Malignant neoplasm of breast 0.007372538 4 0 BeFree_GAD
Malignant neoplasm of lung 0.005005506 2 0 BeFree_GAD
Genetic Determinants of T-Cell Homeostasis in Critical Illness: An Exploratory Analysis of Immune Gene Variants and TREC Dynamics.
Gracheva AS, Kashatnikova DA, Khadzhieva MB, Zakharchenko VE, Krylova TN, Kuzovlev AN, Salnikova LE J Pers Med 2026-05-23
[Cockayne syndrome: peculiarities of clinical manifestations and algorithm of observation in childhood].
Kungurtseva AL, Popovich AV, Tikhonovich YV, Ivannikova TE, Kovalskaia VA, Vasiliev PA, Vitebskaya AV Probl Endokrinol (Mosk) 2026-03-07
ERCC3-Related Genes May Aid in the Prognostic and Immunotherapeutic Analysis of Hepatocellular Carcinoma.
Yang C, Chen Y, Tao T, Xu P, Li M, Deng B, Lu S, Yang M, Wang W, Wang J, Liu SB Comb Chem High Throughput Screen IF: 1.7 2025-00-00
ERCC3 serves as a prognostic biomarker for hepatocellular carcinoma and positively regulates cell proliferation and migration.
Yang C, Du J, Qiu X, Jia C, Ding C, Wu Y, Gao C, Wang W, Wang X, Liu SB Discov Oncol IF: 2.9 2025-03-28
Uterine sarcoma with KAT6B/A::KANSL1 fusion: a molecular and clinicopathological study on 9 cases.
Dundr P, Dvořák J, Krausová M, Hojný J, Hájková N, Stružinská I, Němejcová K, Ondič O, Michal M, Michalová K, Berjón A, Jedryka M, Książek M, Poprawski T, Ryś J, Volodko N, Zapardiel I, Zima T, Cibula D, Poncová R, Matěj R, Kendall Bártů M Virchows Arch IF: 3.0 2025-03-00
Somatic Mutation Profiling and Therapeutic Landscape of Breast Cancer in the MENA Region.
Velayutham D, Elango R, Rashid S, Al-Sarraf R, Akhtar M, Ouararhni K, Jithesh PV, Alajez NM Cells IF: 5.2 2025-11-14
Gene Expression-Based Inference of Metabolic Signatures Reveals Distinct Molecular Profiles in Right- and Left-Sided Colon Cancer.
Ertuğrul I, Çelik AB, Al M, Duman M, Altuntaş YE, Polat E, Ertuğrul YE, Küçük HF, Tutar Y Metabolites IF: 3.7 2025-11-27
Mesothelioma in situ of the peritoneum: report of three cases and review of the literature.
Symes E, Tjota M, Cody B, Kindler H, Mitchell O, Witmer H, Turaga K, Mueller J, Krausz T, Husain AN, Li H Histopathology IF: 3.8 2024-02-00

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