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E-MTAB-7544 transcription profiling by array Solanum lycopersicum

The tomato MYB21 acts in ovules to mediate jasmonate-regulated fertility (Microarray)

提交 2009年1月1日 ·发布 2019年10月15日 ·更新 2019年11月4日
18
样本数
18
实验数
1
芯片平台
1
相关文献
实验描述

The function of the plant hormone jasmonic acid (JA) in development of tomato flowers was analyzed with a mutant defective in JA perception (jasmonate-insensitive1-1, jai1-1). In contrast to Arabidopsis JA-insensitive plants that are male sterile, the tomato mutant jai1-1 exhibits major defects in female development resulting in female sterility. To identify putative JA-dependent regulatory components, transcriptomics was performed using isolated ovules of three different stages of flower development, from both wild type and jai1-1. Among the strongly down-regulated genes in jai1-1, one encoding a MYB transcription factor (SlMYB21) was found. Its orthologue in Arabidopsis has a crucial role in JA-regulated stamen development. SlMYB21 showed transcription factor activity in yeast, interaction with SlJAZ9 in yeast and in planta, and complemented the Arabidopsis mutant myb21-5. To analyze SlMYB21 function in tomato ovule development, CRISPR/Cas9 mutants were created and a TILLING mutant was identified, all showing female sterility and therefore corroborating a function of MYB21 in tomato ovule development. Transcriptomics from wild type, jai1-1 and myb21-2 carpels revealed processes that might be controlled by SlMYB21. The data suggest a positive regulation of JA biosynthesis by SlMYB21, but a negative regulation of the action of auxin and GA. The results demonstrate that SlMYB21 mediates at least partially the action of JA and might control the flower to fruit transition.

参考文献
Tomato MYB21 Acts in Ovules to Mediate Jasmonate-Regulated Fertility.
Schubert R, Dobritzsch S, Gruber C, Hause G, Athmer B, Schreiber T, Marillonnet S, Okabe Y, Ezura H, Acosta IF, Tarkowska D, Hause B.
PMID: 30894458
芯片平台
A-MEXP-2332
Agilent Tomato Gene Expression Microarray 4x44K 022270(18 例)
样本属性
age
5 week
cultivar
Microtom
developmental stage
flower development stage 1, flower development stage 3, flower development stage 6
genotype
jai1-1, wild type genotype
organism
Solanum lycopersicum
organism part
plant ovule
实验信息
登记号
E-MTAB-7544
实验类型
transcription profiling by array
物种
Solanum lycopersicum
提交日期
2009年1月1日
发布日期
2019年10月15日
更新日期
2019年11月4日
提交者
Bettina Hause、 Ramona Schubert、 Bendikt Athmer
分析服务
分析服务

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