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E-MTAB-10404 RNA-seq of coding RNA Homo sapiens, Homo sapiens

Gene profiling of human iPS-ECs with monoallelic and biallelic mutation in HNF1A gene as compared to isogenic hiPS-ECs control cells

·发布 2026年2月19日
12
样本数
12
实验数
实验描述

Induced pluripotent stem cells (iPSCs) provide a well-defined source of tissue-specific cells and are invaluable disease modeling tools. As HNF1A-MODY patients were shown to exhibit diabetic microvascular complications, their iPSCs can be used to derive endothelial cells (ECs) and investigate possible mechanisms contributing to the complications. However, the clinical phenotype of HNF1A-MODY diabetes varies considerably, and studies examining correlations between genotype and phenotype are still rare. Therefore, in the current study, we looked for possible endothelial dysfunction using iPSCs as disease modeling tools. HNF1A-MODY phenotype was modeled through the introduction of mutations in HNF1A gene in control human induced pluripotent stem cells (hiPSCs) lines, using CRISPR/Cas9, generating both monoallelic and biallelic mutation in HNF1A. The mutations resulted in premature stop codon of HNF1A gene. Subsequently, all lines were differentiated toward ECs (hiPSC-ECs), cell sorted to obtain pure population of CD31+/VE-cad+ cells, and used for global transcriptome analysis.

样本属性
Organism
Homo sapiens
Sex
male
Developmental stage
adult
Disease
normal
Organism part
vasculature
Progenitor cell type
induced pluripotent stem cell
Cell type
endothelial cell
Genetic modification
biallelic CRISPR Cas9 mutation of HNF1A, monoallelic CRISPR Cas9 mutation of HNF1A, none
Phenotype
wild type, MODY
实验信息
登记号
E-MTAB-10404
实验类型
RNA-seq of coding RNA
物种
Homo sapiens, Homo sapiens
发布日期
2026年2月19日
提交者
Neli Kachamakova-Trojanowska
分析服务
分析服务

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