主页 实验库实验详情
E-GEOD-76940 GSE76940 transcription profiling by array Mus musculus

Compare proB cells from WT, Tp53-/-, Lnk-/-, Tp53-/-Lnk-/- mice and Tp53-/-Lnk-/-B-ALL

·发布 2016年4月1日 ·更新 2016年4月11日
15
样本数
15
实验数
1
芯片平台
实验描述

The adaptor protein LNK (SH2B3) has emerged as an important protein in regulating B cell development B cell leukemia. Loss-of-function mutations in LNK (SH2B3) are found in Philadelphia chromosome–like acute lymphoblastic leukemia (Ph-like ALL), but how LNK regulates normal B cell development or promotes leukemogenesis remains unclear. We found that combined loss of Lnk and tumor suppressors Tp53 in mice triggers a highly aggressive and transplantable precursor B-ALL. This study aims to investigate the molecular mechanism by which LNK regulates B-ALL development. We performed expression profiling of bone marrow proB progenitors from WT, Tp53-/-, Lnk-/- and preleukemic healthy Tp53/Lnk double knockout (DKO) mice, as well as leukemic bone marrow cells from DKO mice that have developed B-ALL. Results suggest that Tp53-/-Lnk-/- B-ALLs display similar gene expression profiles to human Ph-like B-ALLs, suggesting this model for preclinical and molecular studies. B220+CD19+CD43+AA4.1+IgM-NK1.1-Ly6c- bone marrow proB cells were double sorted from WT, Tp53-/-, Lnk-/- and preleukemic healthy Tp53/Lnk double knockout (DKO) mice, as well as leukemic bone marrow cells from DKO mice that have developed B-ALL. RNA was isolated using miRNeasy kit from QIAGEN and processed using the NuGEN Pico kit. The microarray analysis was performed at the PENN Molecular Profiling/Genomics Facility using GeneChip Mouse Gene 2.0ST array (Affymetrix).

芯片平台
A-GEOD-16570
[MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version](15 例)
样本属性
cell type
B-ALL leukemic blasts, proB cells (B220+CD19+CD43+AA4.1+IgM-NK1.1-Ly6c- )
developmental stage
adult
disease state
control, leukemia
genotype
Lnk-/-, Tp53-/-, Tp53-/-Lnk-/-, WT
organism
Mus musculus
organism part
bone marrow
strain
C57BL/6
实验信息
登记号
E-GEOD-76940
GEO 编号
GSE76940
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2016年4月1日
更新日期
2016年4月11日
提交者
Shane Glasgow、 Haibing Zhang、 Anchit Bhagat、 Dehua Pei、 Chao Wu、 John K Choi、 Ying Cheng、 Kudakwashe Chikwava、 Wei Tong
分析服务
分析服务

联系地址

山东省济南市章丘区文博路2号

齐鲁师范学院 genelibs生信实验室

山东省济南市高新区舜华路750号

大学科技园北区F座4单元2楼

电话: 0531-88819269

微信公众号

关注微信订阅号,实时查看信息,关注医学生物学动态。


商务邮箱

E-mail: product@genelibs.com