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E-GEOD-73419 GSE73419, SRP064167 RNA-seq of coding RNA Xenopus laevis

Tissue gene expression of Xenopus laevis J strain [tissue]

·发布 Oct. 24, 2016 ·更新 Oct. 25, 2016
28
样本数
28
实验数
1
相关文献
实验描述

Comprehensive RNA-seq experiments to measure the expression of homoeologs across different tissues, as a part of the Xenopus laevis genome project. This work is funded by Agency Japanese Ministry of Education, Culture, Sports, Science and Technology (MEXT; "Genome Science" Grant ID 221S0002). Collect mRNA from whole tissue; two female frogs were used as donors for most tissues (Taira dataset for one frog, Ueno dataset for the other frog); testis samples were collected from two male frogs (sibling of two female donors)

参考文献
Genome evolution in the allotetraploid frog Xenopus laevis.
Session AM, Uno Y, Kwon T, Chapman JA, Toyoda A, Takahashi S, Fukui A, Hikosaka A, Suzuki A, Kondo M, van Heeringen SJ, Quigley I, Heinz S, Ogino H, Ochi H, Hellsten U, Lyons JB, Simakov O, Putnam N, Stites J, Kuroki Y, Tanaka T, Michiue T, Watanabe M, Bogdanovic O, Lister R, Georgiou G, Paranjpe SS, van Kruijsbergen I, Shu S, Carlson J, Kinoshita T, Ohta Y, Mawaribuchi S, Jenkins J, Grimwood J, Schmutz J, Mitros T, Mozaffari SV, Suzuki Y, Haramoto Y, Yamamoto TS, Takagi C, Heald R, Miller K, Haudenschild C, Kitzman J, Nakayama T, Izutsu Y, Robert J, Fortriede J, Burns K, Lotay V, Karimi K, Yasuoka Y, Dichmann DS, Flajnik MF, Houston DW, Shendure J, DuPasquier L, Vize PD, Zorn AM, Ito M, Marcotte EM, Wallingford JB, Ito Y, Asashima M, Ueno N, Matsuda Y, Veenstra GJ, Fujiyama A, Harland RM, Taira M, Rokhsar DS
PMID: 27762356
样本属性
clutch
Taira, Ueno
organism
Xenopus laevis
organism part
brain, eye, heart, intestine, kidney, liver, lung, muscle, ovary, pancreas, skin, spleen, stomach, testis
strain
J-strain
实验信息
登记号
E-GEOD-73419
GEO 编号
GSE73419, SRP064167
实验类型
RNA-seq of coding RNA
物种
Xenopus laevis
发布日期
Oct. 24, 2016
更新日期
Oct. 25, 2016
提交者
Masanori Taira、 Taejoon Kwon、 Naoto Ueno、 Atsushi Toyoda、 Yutaka Suzuki、 Shuji Takahashi、 Taejoon Kwon
分析服务
分析服务

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