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E-GEOD-66732 GSE66732, SRP056034 methylation profiling by high throughpu… Homo sapiens

Romidepsin and azacitidine synergize in their epigenetic modulatory effects to induce apoptosis in CTCL

·Released March 30, 2016 ·Updated April 3, 2016
8
Samples
8
Assays
Description

We demonstrate that the combination of the HDAC inhibitor, romidepsin, and the demethylating agent, azacitidine, exerts synergistic anti-proliferative effects and induction of apoptosis involving activation of the caspase cascade in CTCL cell lines as well as CD4+ T cells derived from patients with Sézary Syndrome (SS) with high tumor burden. We identified genes that were selectively induced by the combination treatment, such the tumor suppressor gene RhoB. We performed global CpG methylation-sequencing in a CTCL cell line and in patient cells. Results showed a subset of genes with a unique change in methylation profile in the combination treatment as compared to single drugs.

Sample Attributes
disease
CTCL
organism
Homo sapiens
origin
cell culture, patient derived
Experiment Info
Accession
E-GEOD-66732
GEO ID
GSE66732, SRP056034
Type
methylation profiling by high throughput sequencing
Organism
Homo sapiens
Released
March 30, 2016
Updated
April 3, 2016
Submitter
Sima Rozati、 Reinhard Dummer、 Mitchell P Levesque、 Kazuyasu Fujii、 Phil Fang Cheng、 Phil F Cheng、 Daniel S Widmer
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