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E-GEOD-58511 GSE58511, SRP043321 ChIP-seq Homo sapiens

Genome-wide identification of CRISPR/Cas9 off-targets in human genome

·发布 June 18, 2014 ·更新 Aug. 13, 2014
9
样本数
9
实验数
实验描述

By a robust unbiased ChIP-seq approach, we demonstrated that CRISPR/Cas9 had crRNA-specific off-target binding activities in human genome. However, most of those binding off-targets could not be efficiently cleaved both in vivo and in vitro which suggested the cleavage off-target activity of CRISPR/Cas9 in human genome is very limited. We provided a valuable tool to further investigate the molecular mechanism of CRISPR/Cas9 and to optimize its in vivo targeting sgRNA binding sites were identified with ChipSeq by using GFP antibody (there are 2 replicates for egfa-t1 sgRNA,emx1 sgRNA and control without sgRNA in Hek293T cells, one egfa-t1 sgRNA,emx1 sgRNA and control without sgRNA in HeLaS3 cells)

样本属性
cell line
HEK293T, HeLaS3
chip antibody
GFP antibody
organism
Homo sapiens
transfected with
egfa-t1 sgRNA, emx1 sgRNA, none (control)
实验信息
登记号
E-GEOD-58511
GEO 编号
GSE58511, SRP043321
实验类型
ChIP-seq
物种
Homo sapiens
发布日期
June 18, 2014
更新日期
Aug. 13, 2014
提交者
Yu Zhang、 Jinzhi Duan、 xie zhan、 Guangqing Lu
分析服务
分析服务

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