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E-GEOD-52775 GSE52775 transcription profiling by array Homo sapiens

Gene expression study in CLL of B-cell receptor triggering (miRNA study)

·发布 Jan. 1, 2014 ·更新 June 3, 2014
32
样本数
32
实验数
1
芯片平台
实验描述

The B-cell receptor (BCR) plays an important role in pathogenesis and progression of chronic lymphocytic leukemia (CLL). We investigated the BCR triggering-dependent microRNA modulation by stimulating CLL cells with immobilized anti-IgM. miRome of immobilized anti-IgM stimulated CLL cells (n=16) identified a substantial upregulation of miR-132 in both unmutated (UM) and mutated (M) IGHV subgroups. A parallel gene expression profile and an in-silico analysis to identify miR-132 target genes¸ allowed us to focus on SIRT1, that encodes for a histone deacetylase targeting several proteins including TP53. We defined a reduction of SIRT1 protein levels upon immobilized anti-IgM stimulation (P=0.001), and a concomitant increase in TP53 acetylation (P=0.0072). The TP53 target gene CDKN1A was consistently up-regulated in immobilized anti-IgM stimulated CLL cells. Of note, the miR-132 constitutive expression levels in CLL cases (n=134) were of similar magnitude of those obtained in in vitro immobilized anti-IgM stimulated CLL cells. Additionally, high miR-132 expression levels retained a favorable prognostic impact in M (P=0.005), but not in UM CLL patients (P=0.968). The described miR-132/SIRT1/TP53 axis, sequentially characterized by BCR triggering, miR-132 up-regulation, SIRT1 down-regulation and TP53 acetylation, should be considered in the light of emerging drugs targeting the BCR pathway in CLL. investigated the BCR triggering-dependent gene expression modulation by stimulating CLL cells with immobilized anti-IgM.

芯片平台
A-GEOD-11487
Agilent-021827 Human miRNA Microarray [miRNA_107_Sep09_2_105](32 例)
样本属性
cell type
B-CLL
organism
Homo sapiens
organism part
Peripheral blood
sex
male
实验信息
登记号
E-GEOD-52775
GEO 编号
GSE52775
实验类型
transcription profiling by array
物种
Homo sapiens
发布日期
Jan. 1, 2014
更新日期
June 3, 2014
提交者
Valter Gattei、 Riccardo Bomben、 daniela marconi
分析服务
分析服务

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